Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
GGPS1O95749 PCGF3-213ENST00000620529 1899 ntBASIC18.37■□□□□ 0.53
GGPS1O95749 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
GGPS1O95749 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.37■□□□□ 0.53
GGPS1O95749 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GGPS1O95749 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GGPS1O95749 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GGPS1O95749 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.36■□□□□ 0.53
GGPS1O95749 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GGPS1O95749 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GGPS1O95749 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GGPS1O95749 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GGPS1O95749 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GGPS1O95749 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GGPS1O95749 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
GGPS1O95749 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
GGPS1O95749 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.36■□□□□ 0.53
GGPS1O95749 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GGPS1O95749 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
GGPS1O95749 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.36■□□□□ 0.53
GGPS1O95749 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
GGPS1O95749 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GGPS1O95749 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.36■□□□□ 0.53
GGPS1O95749 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
GGPS1O95749 AL080243.2-201ENST00000418783 582 ntBASIC18.36■□□□□ 0.53
GGPS1O95749 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.36■□□□□ 0.53
GGPS1O95749 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.36■□□□□ 0.53
GGPS1O95749 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.36■□□□□ 0.53
GGPS1O95749 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
GGPS1O95749 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
GGPS1O95749 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
GGPS1O95749 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.36■□□□□ 0.53
GGPS1O95749 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.36■□□□□ 0.53
GGPS1O95749 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GGPS1O95749 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.36■□□□□ 0.53
GGPS1O95749 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
GGPS1O95749 AL844908.2-201ENST00000609461 460 ntBASIC18.36■□□□□ 0.53
GGPS1O95749 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
GGPS1O95749 AC009118.2-201ENST00000613275 655 ntBASIC18.36■□□□□ 0.53
GGPS1O95749 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.36■□□□□ 0.53
GGPS1O95749 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GGPS1O95749 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
GGPS1O95749 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.36■□□□□ 0.53
GGPS1O95749 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GGPS1O95749 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GGPS1O95749 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GGPS1O95749 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GGPS1O95749 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GGPS1O95749 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.35■□□□□ 0.53
GGPS1O95749 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.35■□□□□ 0.53
GGPS1O95749 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
GGPS1O95749 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
GGPS1O95749 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.35■□□□□ 0.53
GGPS1O95749 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
GGPS1O95749 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
GGPS1O95749 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
GGPS1O95749 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GGPS1O95749 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GGPS1O95749 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GGPS1O95749 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.35■□□□□ 0.53
GGPS1O95749 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.35■□□□□ 0.53
GGPS1O95749 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.35■□□□□ 0.53
GGPS1O95749 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GGPS1O95749 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.35■□□□□ 0.53
GGPS1O95749 AC009407.1-201ENST00000568958 598 ntBASIC18.35■□□□□ 0.53
GGPS1O95749 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
GGPS1O95749 AC239800.4-201ENST00000603712 296 ntBASIC18.35■□□□□ 0.53
GGPS1O95749 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GGPS1O95749 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
GGPS1O95749 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GGPS1O95749 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
GGPS1O95749 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GGPS1O95749 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GGPS1O95749 AC078925.2-201ENST00000624013 1973 ntBASIC18.35■□□□□ 0.53
GGPS1O95749 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GGPS1O95749 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
GGPS1O95749 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.35■□□□□ 0.53
GGPS1O95749 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
GGPS1O95749 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.35■□□□□ 0.53
GGPS1O95749 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
GGPS1O95749 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
GGPS1O95749 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GGPS1O95749 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.34■□□□□ 0.53
GGPS1O95749 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
GGPS1O95749 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.34■□□□□ 0.53
GGPS1O95749 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GGPS1O95749 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GGPS1O95749 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GGPS1O95749 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.34■□□□□ 0.53
GGPS1O95749 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
GGPS1O95749 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
GGPS1O95749 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.34■□□□□ 0.53
GGPS1O95749 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
GGPS1O95749 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GGPS1O95749 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.34■□□□□ 0.53
GGPS1O95749 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
GGPS1O95749 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GGPS1O95749 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GGPS1O95749 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
GGPS1O95749 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms