Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDH8O95206 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDH8O95206 AC092580.3-201ENST00000430932 139 ntBASIC16.38■□□□□ 0.21
PCDH8O95206 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDH8O95206 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDH8O95206 AC093724.1-201ENST00000448659 1027 ntBASIC16.38■□□□□ 0.21
PCDH8O95206 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDH8O95206 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH8O95206 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDH8O95206 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.38■□□□□ 0.21
PCDH8O95206 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDH8O95206 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH8O95206 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PCDH8O95206 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH8O95206 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH8O95206 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH8O95206 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH8O95206 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDH8O95206 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH8O95206 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH8O95206 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PCDH8O95206 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH8O95206 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH8O95206 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDH8O95206 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH8O95206 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PCDH8O95206 PCGF3-213ENST00000620529 1899 ntBASIC16.37■□□□□ 0.21
PCDH8O95206 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH8O95206 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH8O95206 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
PCDH8O95206 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDH8O95206 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH8O95206 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDH8O95206 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH8O95206 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH8O95206 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCDH8O95206 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH8O95206 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH8O95206 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PCDH8O95206 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH8O95206 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH8O95206 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH8O95206 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH8O95206 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH8O95206 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
PCDH8O95206 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
PCDH8O95206 AC241585.1-201ENST00000433527 519 ntBASIC16.37■□□□□ 0.21
PCDH8O95206 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH8O95206 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH8O95206 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDH8O95206 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.37■□□□□ 0.21
PCDH8O95206 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDH8O95206 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.37■□□□□ 0.21
PCDH8O95206 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.37■□□□□ 0.21
PCDH8O95206 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDH8O95206 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH8O95206 FER1L4-210ENST00000615531 5998 ntBASIC16.37■□□□□ 0.21
PCDH8O95206 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH8O95206 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH8O95206 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH8O95206 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDH8O95206 UBALD1-205ENST00000590891 2641 ntBASIC16.37■□□□□ 0.21
PCDH8O95206 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH8O95206 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PCDH8O95206 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
PCDH8O95206 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH8O95206 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH8O95206 AL035456.1-201ENST00000456064 1369 ntBASIC16.37■□□□□ 0.21
PCDH8O95206 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCDH8O95206 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH8O95206 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDH8O95206 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH8O95206 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH8O95206 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH8O95206 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH8O95206 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDH8O95206 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDH8O95206 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDH8O95206 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PCDH8O95206 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDH8O95206 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH8O95206 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PCDH8O95206 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PCDH8O95206 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH8O95206 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH8O95206 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PCDH8O95206 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH8O95206 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH8O95206 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDH8O95206 TSPY16P-201ENST00000449843 468 ntBASIC16.36■□□□□ 0.21
PCDH8O95206 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH8O95206 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PCDH8O95206 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.36■□□□□ 0.21
PCDH8O95206 AC024267.1-201ENST00000582320 895 ntBASIC16.36■□□□□ 0.21
PCDH8O95206 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDH8O95206 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH8O95206 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDH8O95206 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PCDH8O95206 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH8O95206 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms