Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM3O75382 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM3O75382 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TRIM3O75382 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM3O75382 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
TRIM3O75382 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM3O75382 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM3O75382 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
TRIM3O75382 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM3O75382 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM3O75382 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.37■□□□□ 0.05
TRIM3O75382 HMGA1P7-201ENST00000406908 502 ntBASIC15.37■□□□□ 0.05
TRIM3O75382 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.37■□□□□ 0.05
TRIM3O75382 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.37■□□□□ 0.05
TRIM3O75382 AC091812.2-201ENST00000619081 385 ntBASIC15.37■□□□□ 0.05
TRIM3O75382 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM3O75382 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM3O75382 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM3O75382 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.37■□□□□ 0.05
TRIM3O75382 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM3O75382 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM3O75382 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM3O75382 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM3O75382 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM3O75382 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM3O75382 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM3O75382 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRIM3O75382 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.36■□□□□ 0.05
TRIM3O75382 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM3O75382 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM3O75382 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM3O75382 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM3O75382 AC092919.2-201ENST00000623631 1645 ntBASIC15.36■□□□□ 0.05
TRIM3O75382 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM3O75382 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
TRIM3O75382 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
TRIM3O75382 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRIM3O75382 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM3O75382 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM3O75382 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
TRIM3O75382 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM3O75382 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM3O75382 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
TRIM3O75382 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM3O75382 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM3O75382 FAM58CP-201ENST00000435741 640 ntBASIC15.36■□□□□ 0.05
TRIM3O75382 AC140658.5-201ENST00000438532 169 ntBASIC15.36■□□□□ 0.05
TRIM3O75382 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.36■□□□□ 0.05
TRIM3O75382 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM3O75382 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.36■□□□□ 0.05
TRIM3O75382 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
TRIM3O75382 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM3O75382 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.36■□□□□ 0.05
TRIM3O75382 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.36■□□□□ 0.05
TRIM3O75382 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.36■□□□□ 0.05
TRIM3O75382 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.36■□□□□ 0.05
TRIM3O75382 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.36■□□□□ 0.05
TRIM3O75382 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.36■□□□□ 0.05
TRIM3O75382 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.36■□□□□ 0.05
TRIM3O75382 MIR4469-201ENST00000583919 79 ntBASIC15.36■□□□□ 0.05
TRIM3O75382 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.36■□□□□ 0.05
TRIM3O75382 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM3O75382 AL691403.2-201ENST00000618460 490 ntBASIC15.36■□□□□ 0.05
TRIM3O75382 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.36■□□□□ 0.05
TRIM3O75382 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM3O75382 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRIM3O75382 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.36■□□□□ 0.05
TRIM3O75382 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM3O75382 TUBB8P12-201ENST00000308911 1335 ntBASIC15.36■□□□□ 0.05
TRIM3O75382 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM3O75382 TUBB7P-202ENST00000428444 1305 ntBASIC15.36■□□□□ 0.05
TRIM3O75382 TUBB8P7-204ENST00000567960 1332 ntBASIC15.36■□□□□ 0.05
TRIM3O75382 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM3O75382 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
TRIM3O75382 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
TRIM3O75382 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM3O75382 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM3O75382 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.36■□□□□ 0.05
TRIM3O75382 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM3O75382 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM3O75382 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM3O75382 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.36■□□□□ 0.05
TRIM3O75382 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
TRIM3O75382 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRIM3O75382 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRIM3O75382 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM3O75382 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
TRIM3O75382 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM3O75382 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM3O75382 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM3O75382 ELL2P1-201ENST00000413990 1906 ntBASIC15.35■□□□□ 0.05
TRIM3O75382 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM3O75382 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM3O75382 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM3O75382 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TRIM3O75382 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM3O75382 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.35■□□□□ 0.05
TRIM3O75382 ACTG1P14-201ENST00000446382 1122 ntBASIC15.35■□□□□ 0.05
TRIM3O75382 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
TRIM3O75382 AC004967.1-201ENST00000453589 447 ntBASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms