Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 MTHFR-217ENST00000641820 1569 ntBASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 METTL21AP1-201ENST00000438852 635 ntBASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 SLC25A6P2-201ENST00000497974 877 ntBASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 AC112191.1-201ENST00000523689 701 ntBASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 AC091812.2-201ENST00000619081 385 ntBASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ME2P1-201ENST00000426028 1970 ntBASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 AL031432.2-201ENST00000566714 459 ntBASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 AL928711.1-201ENST00000570165 459 ntBASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
TCRBV4S1A1TA0A5B7 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms