Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.78□□□□□ -0.2
TRBV6-7A0A0A0MS04 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV6-7A0A0A0MS04 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV6-7A0A0A0MS04 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV6-7A0A0A0MS04 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TRBV6-7A0A0A0MS04 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.78□□□□□ -0.2
TRBV6-7A0A0A0MS04 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV6-7A0A0A0MS04 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV6-7A0A0A0MS04 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV6-7A0A0A0MS04 AC006504.4-201ENST00000592118 1568 ntBASIC13.78□□□□□ -0.2
TRBV6-7A0A0A0MS04 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TRBV6-7A0A0A0MS04 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.78□□□□□ -0.2
TRBV6-7A0A0A0MS04 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV6-7A0A0A0MS04 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV6-7A0A0A0MS04 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.78□□□□□ -0.2
TRBV6-7A0A0A0MS04 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV6-7A0A0A0MS04 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRBV6-7A0A0A0MS04 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRBV6-7A0A0A0MS04 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRBV6-7A0A0A0MS04 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRBV6-7A0A0A0MS04 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRBV6-7A0A0A0MS04 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 ELK2BP-201ENST00000415014 1224 ntBASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 CDC14C-201ENST00000428251 1719 ntBASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 RNF146-204ENST00000476956 884 ntTSL 2 BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 TPM1-226ENST00000560959 925 ntTSL 2 BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 MIR3652-201ENST00000579335 131 ntBASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 AC005412.3-201ENST00000580309 715 ntBASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 AC006557.2-201ENST00000592985 1240 ntBASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 AC010654.1-201ENST00000615722 808 ntBASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.77□□□□□ -0.21
TRBV6-7A0A0A0MS04 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 AC016027.1-202ENST00000607927 1699 ntBASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 AC129492.6-201ENST00000611383 1305 ntBASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
TRBV6-7A0A0A0MS04 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms