Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 BEND3P3-201ENST00000611030 2440 ntBASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 MIR648-201ENST00000385046 94 ntBASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 BX842568.3-201ENST00000418104 571 ntBASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 TK1-204ENST00000590430 683 ntTSL 3 BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 MIR6724-1-201ENST00000616420 92 ntBASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 MIR6724-2-201ENST00000616483 92 ntBASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 MIR6724-4-201ENST00000617390 92 ntBASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 MIR6724-3-201ENST00000622482 92 ntBASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms