Protein–RNA interactions for Protein: Q9UPR3

SMG5, Protein SMG5, humanhuman

Known RBP Predictions only

Length 1,016 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5Q9UPR3 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SMG5Q9UPR3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMG5Q9UPR3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SMG5Q9UPR3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMG5Q9UPR3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMG5Q9UPR3 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMG5Q9UPR3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMG5Q9UPR3 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SMG5Q9UPR3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMG5Q9UPR3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 AC092919.2-201ENST00000623631 1645 ntBASIC17.32■□□□□ 0.36
SMG5Q9UPR3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 EGFEM1P-202ENST00000431685 1563 ntBASIC17.32■□□□□ 0.36
SMG5Q9UPR3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 MIR943-201ENST00000401286 94 ntBASIC17.32■□□□□ 0.36
SMG5Q9UPR3 AC005237.2-201ENST00000434368 219 ntBASIC17.32■□□□□ 0.36
SMG5Q9UPR3 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 FAM207CP-201ENST00000443486 507 ntBASIC17.32■□□□□ 0.36
SMG5Q9UPR3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 AC051619.7-201ENST00000568314 623 ntBASIC17.32■□□□□ 0.36
SMG5Q9UPR3 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMG5Q9UPR3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.31■□□□□ 0.36
SMG5Q9UPR3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.31■□□□□ 0.36
SMG5Q9UPR3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMG5Q9UPR3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMG5Q9UPR3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
SMG5Q9UPR3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.31■□□□□ 0.36
SMG5Q9UPR3 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SMG5Q9UPR3 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMG5Q9UPR3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMG5Q9UPR3 OR8S1-201ENST00000310194 1080 ntBASIC17.31■□□□□ 0.36
SMG5Q9UPR3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMG5Q9UPR3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.31■□□□□ 0.36
SMG5Q9UPR3 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.31■□□□□ 0.36
SMG5Q9UPR3 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.31■□□□□ 0.36
SMG5Q9UPR3 MEIS3P1-201ENST00000495167 958 ntBASIC17.31■□□□□ 0.36
SMG5Q9UPR3 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SMG5Q9UPR3 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.31■□□□□ 0.36
SMG5Q9UPR3 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMG5Q9UPR3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.31■□□□□ 0.36
SMG5Q9UPR3 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.31■□□□□ 0.36
SMG5Q9UPR3 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.31■□□□□ 0.36
SMG5Q9UPR3 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
SMG5Q9UPR3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
SMG5Q9UPR3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.31■□□□□ 0.36
SMG5Q9UPR3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMG5Q9UPR3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SMG5Q9UPR3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMG5Q9UPR3 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.31■□□□□ 0.36
SMG5Q9UPR3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMG5Q9UPR3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMG5Q9UPR3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SMG5Q9UPR3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.3■□□□□ 0.36
SMG5Q9UPR3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMG5Q9UPR3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMG5Q9UPR3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMG5Q9UPR3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.3■□□□□ 0.36
SMG5Q9UPR3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.3■□□□□ 0.36
SMG5Q9UPR3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMG5Q9UPR3 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
SMG5Q9UPR3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMG5Q9UPR3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.3■□□□□ 0.36
SMG5Q9UPR3 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.3■□□□□ 0.36
SMG5Q9UPR3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMG5Q9UPR3 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SMG5Q9UPR3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SMG5Q9UPR3 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms