Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC40Q9H9A6 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LRRC40Q9H9A6 AC007950.2-201ENST00000615045 2347 ntBASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 IL9RP2-201ENST00000423948 1312 ntBASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 BCAR1-209ENST00000546196 1340 ntBASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 FDX1P1-201ENST00000449115 551 ntBASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC40Q9H9A6 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.71■□□□□ 0.26
LRRC40Q9H9A6 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
LRRC40Q9H9A6 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
LRRC40Q9H9A6 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.26
LRRC40Q9H9A6 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
LRRC40Q9H9A6 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
LRRC40Q9H9A6 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 AC140658.5-201ENST00000438532 169 ntBASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 AC004877.2-201ENST00000623941 599 ntBASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 AC025580.3-201ENST00000617932 1424 ntBASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.7■□□□□ 0.26
LRRC40Q9H9A6 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms