Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 RNU1-129P-201ENST00000384064 167 ntBASIC11.5□□□□□ -0.57
UPK3BQ9BT76 RPS8P6-201ENST00000426177 609 ntBASIC11.5□□□□□ -0.57
UPK3BQ9BT76 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 RARRES2P8-201ENST00000566335 367 ntBASIC11.5□□□□□ -0.57
UPK3BQ9BT76 U1.21-201ENST00000580816 167 ntBASIC11.5□□□□□ -0.57
UPK3BQ9BT76 AC004835.2-201ENST00000603762 682 ntBASIC11.5□□□□□ -0.57
UPK3BQ9BT76 AC099522.2-201ENST00000607001 744 ntBASIC11.5□□□□□ -0.57
UPK3BQ9BT76 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 AL513210.1-201ENST00000629608 234 ntBASIC11.5□□□□□ -0.57
UPK3BQ9BT76 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 AC023824.1-201ENST00000562945 2975 ntBASIC11.5□□□□□ -0.57
UPK3BQ9BT76 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
UPK3BQ9BT76 SLC22A20-204ENST00000530038 1673 ntBASIC11.49□□□□□ -0.57
UPK3BQ9BT76 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 BANP-201ENST00000286122 2368 ntTSL 5 BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC11.49□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms