Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFX6Q8HWS3 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX6Q8HWS3 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RFX6Q8HWS3 HCG4B-203ENST00000450128 991 ntBASIC17.14■□□□□ 0.33
RFX6Q8HWS3 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
RFX6Q8HWS3 IGHV3-22-201ENST00000520721 359 ntBASIC17.14■□□□□ 0.33
RFX6Q8HWS3 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.14■□□□□ 0.33
RFX6Q8HWS3 AL645728.2-201ENST00000641974 660 ntBASIC17.14■□□□□ 0.33
RFX6Q8HWS3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
RFX6Q8HWS3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX6Q8HWS3 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX6Q8HWS3 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.14■□□□□ 0.33
RFX6Q8HWS3 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX6Q8HWS3 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX6Q8HWS3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.14■□□□□ 0.33
RFX6Q8HWS3 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX6Q8HWS3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX6Q8HWS3 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.14■□□□□ 0.33
RFX6Q8HWS3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RFX6Q8HWS3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RFX6Q8HWS3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFX6Q8HWS3 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX6Q8HWS3 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX6Q8HWS3 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX6Q8HWS3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFX6Q8HWS3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX6Q8HWS3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.13■□□□□ 0.33
RFX6Q8HWS3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFX6Q8HWS3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.13■□□□□ 0.33
RFX6Q8HWS3 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX6Q8HWS3 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFX6Q8HWS3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX6Q8HWS3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFX6Q8HWS3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX6Q8HWS3 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.13■□□□□ 0.33
RFX6Q8HWS3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.13■□□□□ 0.33
RFX6Q8HWS3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.13■□□□□ 0.33
RFX6Q8HWS3 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.13■□□□□ 0.33
RFX6Q8HWS3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFX6Q8HWS3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX6Q8HWS3 AC021097.1-201ENST00000607902 574 ntBASIC17.13■□□□□ 0.33
RFX6Q8HWS3 AC010507.1-201ENST00000633895 436 ntBASIC17.13■□□□□ 0.33
RFX6Q8HWS3 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX6Q8HWS3 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX6Q8HWS3 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
RFX6Q8HWS3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RFX6Q8HWS3 HLA-A-201ENST00000376802 1334 ntBASIC17.13■□□□□ 0.33
RFX6Q8HWS3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFX6Q8HWS3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX6Q8HWS3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RFX6Q8HWS3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.13■□□□□ 0.33
RFX6Q8HWS3 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX6Q8HWS3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RFX6Q8HWS3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX6Q8HWS3 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX6Q8HWS3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX6Q8HWS3 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RFX6Q8HWS3 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX6Q8HWS3 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX6Q8HWS3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX6Q8HWS3 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RFX6Q8HWS3 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX6Q8HWS3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX6Q8HWS3 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFX6Q8HWS3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX6Q8HWS3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.12■□□□□ 0.33
RFX6Q8HWS3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX6Q8HWS3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX6Q8HWS3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
RFX6Q8HWS3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.12■□□□□ 0.33
RFX6Q8HWS3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.12■□□□□ 0.33
RFX6Q8HWS3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.12■□□□□ 0.33
RFX6Q8HWS3 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.12■□□□□ 0.33
RFX6Q8HWS3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.12■□□□□ 0.33
RFX6Q8HWS3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.12■□□□□ 0.33
RFX6Q8HWS3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.12■□□□□ 0.33
RFX6Q8HWS3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.12■□□□□ 0.33
RFX6Q8HWS3 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX6Q8HWS3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFX6Q8HWS3 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RFX6Q8HWS3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.12■□□□□ 0.33
RFX6Q8HWS3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.12■□□□□ 0.33
RFX6Q8HWS3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.12■□□□□ 0.33
RFX6Q8HWS3 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX6Q8HWS3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFX6Q8HWS3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX6Q8HWS3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
RFX6Q8HWS3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.12■□□□□ 0.33
RFX6Q8HWS3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFX6Q8HWS3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFX6Q8HWS3 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX6Q8HWS3 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
RFX6Q8HWS3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX6Q8HWS3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.12■□□□□ 0.33
RFX6Q8HWS3 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX6Q8HWS3 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.11■□□□□ 0.33
RFX6Q8HWS3 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX6Q8HWS3 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.11■□□□□ 0.33
RFX6Q8HWS3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX6Q8HWS3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms