Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 USP36-216ENST00000589424 970 ntTSL 5 BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 Z99916.2-201ENST00000604037 246 ntBASIC13.73□□□□□ -0.21
ZNF546Q86UE3 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
ZNF546Q86UE3 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF546Q86UE3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.72□□□□□ -0.21
ZNF546Q86UE3 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF546Q86UE3 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
ZNF546Q86UE3 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF546Q86UE3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF546Q86UE3 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF546Q86UE3 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF546Q86UE3 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF546Q86UE3 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
ZNF546Q86UE3 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF546Q86UE3 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF546Q86UE3 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF546Q86UE3 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
ZNF546Q86UE3 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF546Q86UE3 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF546Q86UE3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC13.72□□□□□ -0.21
ZNF546Q86UE3 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF546Q86UE3 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC13.72□□□□□ -0.21
ZNF546Q86UE3 TSPY7P-201ENST00000431358 1114 ntBASIC13.72□□□□□ -0.21
ZNF546Q86UE3 SAPCD2P2-201ENST00000431719 1174 ntBASIC13.72□□□□□ -0.21
ZNF546Q86UE3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC13.72□□□□□ -0.21
ZNF546Q86UE3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC13.72□□□□□ -0.21
ZNF546Q86UE3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF546Q86UE3 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC13.72□□□□□ -0.21
ZNF546Q86UE3 NAPSB-206ENST00000562112 1266 ntBASIC13.72□□□□□ -0.21
ZNF546Q86UE3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC13.72□□□□□ -0.21
ZNF546Q86UE3 AC004263.2-201ENST00000617183 678 ntBASIC13.72□□□□□ -0.21
ZNF546Q86UE3 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
ZNF546Q86UE3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC13.72□□□□□ -0.21
ZNF546Q86UE3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF546Q86UE3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF546Q86UE3 AC069224.1-201ENST00000566372 1715 ntBASIC13.72□□□□□ -0.21
ZNF546Q86UE3 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF546Q86UE3 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF546Q86UE3 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF546Q86UE3 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.72□□□□□ -0.21
ZNF546Q86UE3 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
ZNF546Q86UE3 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF546Q86UE3 REXO1L8P-201ENST00000604378 1897 ntBASIC13.72□□□□□ -0.21
ZNF546Q86UE3 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
ZNF546Q86UE3 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF546Q86UE3 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
ZNF546Q86UE3 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF546Q86UE3 AP003680.1-201ENST00000598970 3660 ntBASIC13.71□□□□□ -0.21
ZNF546Q86UE3 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.71□□□□□ -0.21
ZNF546Q86UE3 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF546Q86UE3 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.71□□□□□ -0.21
ZNF546Q86UE3 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
ZNF546Q86UE3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF546Q86UE3 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.71□□□□□ -0.21
ZNF546Q86UE3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF546Q86UE3 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF546Q86UE3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF546Q86UE3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF546Q86UE3 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF546Q86UE3 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.71□□□□□ -0.21
ZNF546Q86UE3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.71□□□□□ -0.21
ZNF546Q86UE3 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF546Q86UE3 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF546Q86UE3 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.71□□□□□ -0.21
ZNF546Q86UE3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC13.71□□□□□ -0.21
ZNF546Q86UE3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF546Q86UE3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF546Q86UE3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC13.71□□□□□ -0.21
ZNF546Q86UE3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC13.71□□□□□ -0.21
ZNF546Q86UE3 MTCL1P1-201ENST00000446207 792 ntBASIC13.71□□□□□ -0.21
ZNF546Q86UE3 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.71□□□□□ -0.21
ZNF546Q86UE3 AC111152.3-201ENST00000569699 673 ntBASIC13.71□□□□□ -0.21
ZNF546Q86UE3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
ZNF546Q86UE3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC13.71□□□□□ -0.21
ZNF546Q86UE3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms