Protein–RNA interactions for Protein: Q7Z4H3

HDDC2, HD domain-containing protein 2, humanhuman

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2Q7Z4H3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
HDDC2Q7Z4H3 AGGF1P2-201ENST00000426656 2106 ntBASIC15.07■□□□□ 0
HDDC2Q7Z4H3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HDDC2Q7Z4H3 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.07■□□□□ 0
HDDC2Q7Z4H3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.07■□□□□ 0
HDDC2Q7Z4H3 AC006504.4-201ENST00000592118 1568 ntBASIC15.07■□□□□ 0
HDDC2Q7Z4H3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
HDDC2Q7Z4H3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
HDDC2Q7Z4H3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
HDDC2Q7Z4H3 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.06■□□□□ 0
HDDC2Q7Z4H3 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.06■□□□□ 0
HDDC2Q7Z4H3 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HDDC2Q7Z4H3 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
HDDC2Q7Z4H3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.06■□□□□ 0
HDDC2Q7Z4H3 AC078925.2-201ENST00000624013 1973 ntBASIC15.06■□□□□ 0
HDDC2Q7Z4H3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.06■□□□□ 0
HDDC2Q7Z4H3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.06■□□□□ 0
HDDC2Q7Z4H3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.06■□□□□ 0
HDDC2Q7Z4H3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
HDDC2Q7Z4H3 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.06■□□□□ 0
HDDC2Q7Z4H3 RPS2P1-201ENST00000434010 821 ntBASIC15.06■□□□□ 0
HDDC2Q7Z4H3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.06■□□□□ 0
HDDC2Q7Z4H3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.06■□□□□ 0
HDDC2Q7Z4H3 AC105339.3-201ENST00000560043 636 ntBASIC15.06■□□□□ 0
HDDC2Q7Z4H3 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.06■□□□□ 0
HDDC2Q7Z4H3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
HDDC2Q7Z4H3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.06■□□□□ 0
HDDC2Q7Z4H3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.06■□□□□ 0
HDDC2Q7Z4H3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.06■□□□□ 0
HDDC2Q7Z4H3 AC129492.6-201ENST00000611383 1305 ntBASIC15.06■□□□□ 0
HDDC2Q7Z4H3 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
HDDC2Q7Z4H3 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HDDC2Q7Z4H3 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HDDC2Q7Z4H3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.06■□□□□ 0
HDDC2Q7Z4H3 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HDDC2Q7Z4H3 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.06■□□□□ 0
HDDC2Q7Z4H3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.05■□□□□ 0
HDDC2Q7Z4H3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HDDC2Q7Z4H3 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.05■□□□□ 0
HDDC2Q7Z4H3 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
HDDC2Q7Z4H3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.05■□□□□ 0
HDDC2Q7Z4H3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.05■□□□□ 0
HDDC2Q7Z4H3 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HDDC2Q7Z4H3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.05■□□□□ 0
HDDC2Q7Z4H3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.05■□□□□ 0
HDDC2Q7Z4H3 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.05■□□□□ 0
HDDC2Q7Z4H3 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HDDC2Q7Z4H3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.05■□□□□ 0
HDDC2Q7Z4H3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HDDC2Q7Z4H3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.05■□□□□ 0
HDDC2Q7Z4H3 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HDDC2Q7Z4H3 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
HDDC2Q7Z4H3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.05■□□□□ -0
HDDC2Q7Z4H3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.05■□□□□ -0
HDDC2Q7Z4H3 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.05■□□□□ -0
HDDC2Q7Z4H3 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.05■□□□□ -0
HDDC2Q7Z4H3 AL450487.1-201ENST00000426799 995 ntBASIC15.05■□□□□ -0
HDDC2Q7Z4H3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ -0
HDDC2Q7Z4H3 DUSP5P1-201ENST00000441325 1139 ntBASIC15.05■□□□□ -0
HDDC2Q7Z4H3 AC005412.3-201ENST00000580309 715 ntBASIC15.05■□□□□ -0
HDDC2Q7Z4H3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.05■□□□□ -0
HDDC2Q7Z4H3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.05■□□□□ -0
HDDC2Q7Z4H3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.05■□□□□ -0
HDDC2Q7Z4H3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.05■□□□□ -0
HDDC2Q7Z4H3 AC002310.6-201ENST00000624451 1377 ntBASIC15.05■□□□□ -0
HDDC2Q7Z4H3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HDDC2Q7Z4H3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.05■□□□□ -0
HDDC2Q7Z4H3 AC006277.1-201ENST00000624348 1610 ntBASIC15.05■□□□□ -0
HDDC2Q7Z4H3 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
HDDC2Q7Z4H3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HDDC2Q7Z4H3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
HDDC2Q7Z4H3 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.05■□□□□ -0
HDDC2Q7Z4H3 AC104640.1-201ENST00000562617 2109 ntBASIC15.05■□□□□ -0
HDDC2Q7Z4H3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
HDDC2Q7Z4H3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.05■□□□□ -0
HDDC2Q7Z4H3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
HDDC2Q7Z4H3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HDDC2Q7Z4H3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HDDC2Q7Z4H3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
HDDC2Q7Z4H3 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
HDDC2Q7Z4H3 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HDDC2Q7Z4H3 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HDDC2Q7Z4H3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.04■□□□□ -0
HDDC2Q7Z4H3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.04■□□□□ -0
HDDC2Q7Z4H3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
HDDC2Q7Z4H3 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.04■□□□□ -0
HDDC2Q7Z4H3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
HDDC2Q7Z4H3 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.04■□□□□ -0
HDDC2Q7Z4H3 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.04■□□□□ -0
HDDC2Q7Z4H3 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.04■□□□□ -0
HDDC2Q7Z4H3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.04■□□□□ -0
HDDC2Q7Z4H3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.04■□□□□ -0
HDDC2Q7Z4H3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HDDC2Q7Z4H3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.04■□□□□ -0
HDDC2Q7Z4H3 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HDDC2Q7Z4H3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.04■□□□□ -0
HDDC2Q7Z4H3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.04■□□□□ -0
HDDC2Q7Z4H3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.04■□□□□ -0
HDDC2Q7Z4H3 AC018712.1-201ENST00000455767 687 ntBASIC15.04■□□□□ -0
HDDC2Q7Z4H3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms