Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SHFQ7M4L6 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.93□□□□□ -0.02
SHFQ7M4L6 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.93□□□□□ -0.02
SHFQ7M4L6 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SHFQ7M4L6 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SHFQ7M4L6 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.93□□□□□ -0.02
SHFQ7M4L6 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHFQ7M4L6 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHFQ7M4L6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.93□□□□□ -0.02
SHFQ7M4L6 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SHFQ7M4L6 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.93□□□□□ -0.02
SHFQ7M4L6 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SHFQ7M4L6 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHFQ7M4L6 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.92□□□□□ -0.02
SHFQ7M4L6 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.92□□□□□ -0.02
SHFQ7M4L6 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.92□□□□□ -0.02
SHFQ7M4L6 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SHFQ7M4L6 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.92□□□□□ -0.02
SHFQ7M4L6 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHFQ7M4L6 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SHFQ7M4L6 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHFQ7M4L6 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SHFQ7M4L6 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHFQ7M4L6 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHFQ7M4L6 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SHFQ7M4L6 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SHFQ7M4L6 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.92□□□□□ -0.02
SHFQ7M4L6 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SHFQ7M4L6 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.92□□□□□ -0.02
SHFQ7M4L6 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.92□□□□□ -0.02
SHFQ7M4L6 AL139424.1-201ENST00000607572 797 ntBASIC14.92□□□□□ -0.02
SHFQ7M4L6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHFQ7M4L6 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.92□□□□□ -0.02
SHFQ7M4L6 TOP3BP1-201ENST00000420768 1380 ntBASIC14.92□□□□□ -0.02
SHFQ7M4L6 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SHFQ7M4L6 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHFQ7M4L6 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.92□□□□□ -0.02
SHFQ7M4L6 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHFQ7M4L6 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SHFQ7M4L6 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
SHFQ7M4L6 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHFQ7M4L6 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SHFQ7M4L6 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHFQ7M4L6 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHFQ7M4L6 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
SHFQ7M4L6 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.92□□□□□ -0.02
SHFQ7M4L6 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.92□□□□□ -0.02
SHFQ7M4L6 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.92□□□□□ -0.02
SHFQ7M4L6 AP005117.1-202ENST00000581724 1908 ntBASIC14.92□□□□□ -0.02
SHFQ7M4L6 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHFQ7M4L6 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.92□□□□□ -0.02
SHFQ7M4L6 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.92□□□□□ -0.02
SHFQ7M4L6 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHFQ7M4L6 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHFQ7M4L6 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.91□□□□□ -0.02
SHFQ7M4L6 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHFQ7M4L6 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHFQ7M4L6 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.91□□□□□ -0.02
SHFQ7M4L6 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SHFQ7M4L6 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHFQ7M4L6 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHFQ7M4L6 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SHFQ7M4L6 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.91□□□□□ -0.02
SHFQ7M4L6 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHFQ7M4L6 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SHFQ7M4L6 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHFQ7M4L6 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHFQ7M4L6 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHFQ7M4L6 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SHFQ7M4L6 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.91□□□□□ -0.02
SHFQ7M4L6 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHFQ7M4L6 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SHFQ7M4L6 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.91□□□□□ -0.02
SHFQ7M4L6 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.91□□□□□ -0.02
SHFQ7M4L6 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHFQ7M4L6 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHFQ7M4L6 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.91□□□□□ -0.02
SHFQ7M4L6 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.91□□□□□ -0.02
SHFQ7M4L6 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC14.91□□□□□ -0.02
SHFQ7M4L6 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHFQ7M4L6 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.91□□□□□ -0.02
SHFQ7M4L6 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.91□□□□□ -0.02
SHFQ7M4L6 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.91□□□□□ -0.02
SHFQ7M4L6 NKAPP1-205ENST00000585790 367 ntBASIC14.91□□□□□ -0.02
SHFQ7M4L6 AC064862.7-201ENST00000604520 867 ntBASIC14.91□□□□□ -0.02
SHFQ7M4L6 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.91□□□□□ -0.02
SHFQ7M4L6 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHFQ7M4L6 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.91□□□□□ -0.02
SHFQ7M4L6 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHFQ7M4L6 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.91□□□□□ -0.02
SHFQ7M4L6 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.91□□□□□ -0.02
SHFQ7M4L6 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHFQ7M4L6 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHFQ7M4L6 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHFQ7M4L6 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SHFQ7M4L6 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SHFQ7M4L6 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
SHFQ7M4L6 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHFQ7M4L6 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHFQ7M4L6 AC013268.4-201ENST00000637413 2228 ntBASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms