Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 PMS2P4-201ENST00000412466 1052 ntBASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 AC092474.2-201ENST00000424288 719 ntBASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 AC007967.2-201ENST00000432613 625 ntBASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 KRT19P2-202ENST00000557173 1012 ntBASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 AC018845.2-201ENST00000568326 409 ntBASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 AC023141.13-201ENST00000604991 943 ntBASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 AL513523.2-202ENST00000427283 2040 ntBASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 AC025580.3-201ENST00000617932 1424 ntBASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 AC024909.3-201ENST00000611513 2257 ntBASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 AC120114.3-201ENST00000611923 658 ntBASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 AC007064.4-201ENST00000637740 555 ntBASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NHLRC1Q6VVB1 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms