Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
RNFT1Q5M7Z0 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RNFT1Q5M7Z0 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.74□□□□□ -0.05
RNFT1Q5M7Z0 AC063926.2-201ENST00000623766 1308 ntBASIC14.74□□□□□ -0.05
RNFT1Q5M7Z0 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
RNFT1Q5M7Z0 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.74□□□□□ -0.05
RNFT1Q5M7Z0 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
RNFT1Q5M7Z0 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RNFT1Q5M7Z0 MTATP6P19-201ENST00000413797 659 ntBASIC14.74□□□□□ -0.05
RNFT1Q5M7Z0 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.74□□□□□ -0.05
RNFT1Q5M7Z0 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RNFT1Q5M7Z0 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RNFT1Q5M7Z0 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNFT1Q5M7Z0 AL512361.1-201ENST00000554200 418 ntBASIC14.74□□□□□ -0.05
RNFT1Q5M7Z0 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
RNFT1Q5M7Z0 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.74□□□□□ -0.05
RNFT1Q5M7Z0 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.74□□□□□ -0.05
RNFT1Q5M7Z0 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.74□□□□□ -0.05
RNFT1Q5M7Z0 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.74□□□□□ -0.05
RNFT1Q5M7Z0 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
RNFT1Q5M7Z0 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNFT1Q5M7Z0 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC14.74□□□□□ -0.05
RNFT1Q5M7Z0 AC025048.6-201ENST00000634326 1161 ntBASIC14.74□□□□□ -0.05
RNFT1Q5M7Z0 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.74□□□□□ -0.05
RNFT1Q5M7Z0 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.74□□□□□ -0.05
RNFT1Q5M7Z0 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.74□□□□□ -0.05
RNFT1Q5M7Z0 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.74□□□□□ -0.05
RNFT1Q5M7Z0 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNFT1Q5M7Z0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNFT1Q5M7Z0 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RNFT1Q5M7Z0 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNFT1Q5M7Z0 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNFT1Q5M7Z0 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RNFT1Q5M7Z0 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.74□□□□□ -0.05
RNFT1Q5M7Z0 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.74□□□□□ -0.05
RNFT1Q5M7Z0 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNFT1Q5M7Z0 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 GAPDHP21-201ENST00000450301 1010 ntBASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 AC010336.2-201ENST00000564226 506 ntBASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RNFT1Q5M7Z0 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 AC005622.1-201ENST00000636801 1703 ntBASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms