Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
GABREP78334 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GABREP78334 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
GABREP78334 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GABREP78334 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
GABREP78334 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
GABREP78334 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
GABREP78334 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
GABREP78334 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.57■□□□□ 0.08
GABREP78334 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GABREP78334 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GABREP78334 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GABREP78334 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GABREP78334 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GABREP78334 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
GABREP78334 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.57■□□□□ 0.08
GABREP78334 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GABREP78334 AC022210.1-201ENST00000449856 793 ntBASIC15.57■□□□□ 0.08
GABREP78334 RN7SL837P-201ENST00000463010 287 ntBASIC15.57■□□□□ 0.08
GABREP78334 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
GABREP78334 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.57■□□□□ 0.08
GABREP78334 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.57■□□□□ 0.08
GABREP78334 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
GABREP78334 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.57■□□□□ 0.08
GABREP78334 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.57■□□□□ 0.08
GABREP78334 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.57■□□□□ 0.08
GABREP78334 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.57■□□□□ 0.08
GABREP78334 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
GABREP78334 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GABREP78334 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GABREP78334 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.57■□□□□ 0.08
GABREP78334 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.57■□□□□ 0.08
GABREP78334 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.57■□□□□ 0.08
GABREP78334 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
GABREP78334 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.57■□□□□ 0.08
GABREP78334 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GABREP78334 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.57■□□□□ 0.08
GABREP78334 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
GABREP78334 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GABREP78334 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.57■□□□□ 0.08
GABREP78334 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GABREP78334 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
GABREP78334 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GABREP78334 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
GABREP78334 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GABREP78334 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.56■□□□□ 0.08
GABREP78334 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GABREP78334 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GABREP78334 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
GABREP78334 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.56■□□□□ 0.08
GABREP78334 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.56■□□□□ 0.08
GABREP78334 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.56■□□□□ 0.08
GABREP78334 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
GABREP78334 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
GABREP78334 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GABREP78334 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
GABREP78334 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
GABREP78334 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
GABREP78334 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
GABREP78334 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
GABREP78334 AC114501.2-201ENST00000439631 535 ntBASIC15.56■□□□□ 0.08
GABREP78334 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.56■□□□□ 0.08
GABREP78334 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
GABREP78334 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
GABREP78334 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.56■□□□□ 0.08
GABREP78334 TPRX2P-201ENST00000535362 881 ntBASIC15.56■□□□□ 0.08
GABREP78334 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GABREP78334 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.56■□□□□ 0.08
GABREP78334 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.56■□□□□ 0.08
GABREP78334 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.56■□□□□ 0.08
GABREP78334 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.56■□□□□ 0.08
GABREP78334 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GABREP78334 TUBB8P12-201ENST00000308911 1335 ntBASIC15.56■□□□□ 0.08
GABREP78334 TUBB7P-202ENST00000428444 1305 ntBASIC15.56■□□□□ 0.08
GABREP78334 TUBB8P7-204ENST00000567960 1332 ntBASIC15.56■□□□□ 0.08
GABREP78334 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GABREP78334 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GABREP78334 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.56■□□□□ 0.08
GABREP78334 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
GABREP78334 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
GABREP78334 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
GABREP78334 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GABREP78334 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GABREP78334 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
GABREP78334 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.56■□□□□ 0.08
GABREP78334 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GABREP78334 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GABREP78334 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
GABREP78334 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.56■□□□□ 0.08
GABREP78334 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GABREP78334 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
GABREP78334 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GABREP78334 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GABREP78334 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.55■□□□□ 0.08
GABREP78334 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GABREP78334 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GABREP78334 AL671710.1-201ENST00000610245 2349 ntBASIC15.55■□□□□ 0.08
GABREP78334 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GABREP78334 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GABREP78334 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms