Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.88■□□□□ 0.29
ATXN3P54252 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATXN3P54252 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATXN3P54252 AC055876.3-201ENST00000431496 288 ntBASIC16.88■□□□□ 0.29
ATXN3P54252 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.88■□□□□ 0.29
ATXN3P54252 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.88■□□□□ 0.29
ATXN3P54252 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATXN3P54252 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.88■□□□□ 0.29
ATXN3P54252 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.88■□□□□ 0.29
ATXN3P54252 AL390955.2-201ENST00000603032 514 ntBASIC16.88■□□□□ 0.29
ATXN3P54252 ACTL9-202ENST00000612068 1252 ntBASIC16.88■□□□□ 0.29
ATXN3P54252 AC138649.4-201ENST00000612222 287 ntBASIC16.88■□□□□ 0.29
ATXN3P54252 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.88■□□□□ 0.29
ATXN3P54252 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATXN3P54252 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ATXN3P54252 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATXN3P54252 TUBB3P1-201ENST00000405796 1332 ntBASIC16.88■□□□□ 0.29
ATXN3P54252 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.88■□□□□ 0.29
ATXN3P54252 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATXN3P54252 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.88■□□□□ 0.29
ATXN3P54252 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATXN3P54252 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATXN3P54252 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATXN3P54252 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATXN3P54252 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.88■□□□□ 0.29
ATXN3P54252 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATXN3P54252 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATXN3P54252 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
ATXN3P54252 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.87■□□□□ 0.29
ATXN3P54252 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATXN3P54252 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATXN3P54252 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATXN3P54252 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
ATXN3P54252 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATXN3P54252 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATXN3P54252 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATXN3P54252 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATXN3P54252 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATXN3P54252 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.87■□□□□ 0.29
ATXN3P54252 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
ATXN3P54252 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATXN3P54252 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.87■□□□□ 0.29
ATXN3P54252 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATXN3P54252 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATXN3P54252 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATXN3P54252 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATXN3P54252 AL662844.4-201ENST00000606367 2838 ntBASIC16.87■□□□□ 0.29
ATXN3P54252 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATXN3P54252 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATXN3P54252 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ATXN3P54252 ADH5P3-201ENST00000433842 1137 ntBASIC16.87■□□□□ 0.29
ATXN3P54252 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATXN3P54252 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.87■□□□□ 0.29
ATXN3P54252 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATXN3P54252 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.87■□□□□ 0.29
ATXN3P54252 AC069335.1-201ENST00000489972 472 ntBASIC16.87■□□□□ 0.29
ATXN3P54252 IGHV3-42-201ENST00000520410 361 ntBASIC16.87■□□□□ 0.29
ATXN3P54252 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.87■□□□□ 0.29
ATXN3P54252 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.87■□□□□ 0.29
ATXN3P54252 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATXN3P54252 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.87■□□□□ 0.29
ATXN3P54252 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATXN3P54252 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.87■□□□□ 0.29
ATXN3P54252 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATXN3P54252 AC012645.4-201ENST00000610691 1061 ntBASIC16.87■□□□□ 0.29
ATXN3P54252 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.87■□□□□ 0.29
ATXN3P54252 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.87■□□□□ 0.29
ATXN3P54252 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
ATXN3P54252 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATXN3P54252 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATXN3P54252 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATXN3P54252 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATXN3P54252 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.87■□□□□ 0.29
ATXN3P54252 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATXN3P54252 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
ATXN3P54252 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.87■□□□□ 0.29
ATXN3P54252 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATXN3P54252 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATXN3P54252 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATXN3P54252 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.87■□□□□ 0.29
ATXN3P54252 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATXN3P54252 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
ATXN3P54252 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATXN3P54252 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
ATXN3P54252 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATXN3P54252 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATXN3P54252 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATXN3P54252 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ATXN3P54252 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
ATXN3P54252 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATXN3P54252 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.86■□□□□ 0.29
ATXN3P54252 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATXN3P54252 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.86■□□□□ 0.29
ATXN3P54252 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.86■□□□□ 0.29
ATXN3P54252 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
ATXN3P54252 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATXN3P54252 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.86■□□□□ 0.29
ATXN3P54252 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATXN3P54252 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.86■□□□□ 0.29
ATXN3P54252 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms