Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ITGA8P53708 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.91■□□□□ 0.3
ITGA8P53708 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ITGA8P53708 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ITGA8P53708 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ITGA8P53708 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ITGA8P53708 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ITGA8P53708 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.91■□□□□ 0.3
ITGA8P53708 AC013268.4-201ENST00000637413 2228 ntBASIC16.91■□□□□ 0.3
ITGA8P53708 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ITGA8P53708 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ITGA8P53708 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ITGA8P53708 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ITGA8P53708 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ITGA8P53708 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
ITGA8P53708 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.91■□□□□ 0.3
ITGA8P53708 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.91■□□□□ 0.3
ITGA8P53708 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.91■□□□□ 0.3
ITGA8P53708 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ITGA8P53708 AC005412.3-201ENST00000580309 715 ntBASIC16.91■□□□□ 0.3
ITGA8P53708 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ITGA8P53708 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ITGA8P53708 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ITGA8P53708 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ITGA8P53708 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ITGA8P53708 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
ITGA8P53708 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ITGA8P53708 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ITGA8P53708 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.91■□□□□ 0.3
ITGA8P53708 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ITGA8P53708 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.91■□□□□ 0.3
ITGA8P53708 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ITGA8P53708 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ITGA8P53708 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.91■□□□□ 0.3
ITGA8P53708 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ITGA8P53708 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ITGA8P53708 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ITGA8P53708 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ITGA8P53708 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.9■□□□□ 0.3
ITGA8P53708 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.9■□□□□ 0.3
ITGA8P53708 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ITGA8P53708 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ITGA8P53708 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ITGA8P53708 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ITGA8P53708 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
ITGA8P53708 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
ITGA8P53708 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.9■□□□□ 0.3
ITGA8P53708 MIR648-201ENST00000385046 94 ntBASIC16.9■□□□□ 0.3
ITGA8P53708 HCG4-201ENST00000418983 998 ntBASIC16.9■□□□□ 0.3
ITGA8P53708 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.9■□□□□ 0.3
ITGA8P53708 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.9■□□□□ 0.3
ITGA8P53708 AC025062.2-201ENST00000605477 670 ntBASIC16.9■□□□□ 0.3
ITGA8P53708 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.9■□□□□ 0.3
ITGA8P53708 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ITGA8P53708 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.9■□□□□ 0.3
ITGA8P53708 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ITGA8P53708 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ITGA8P53708 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.9■□□□□ 0.3
ITGA8P53708 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ITGA8P53708 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.9■□□□□ 0.3
ITGA8P53708 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ITGA8P53708 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
ITGA8P53708 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ITGA8P53708 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.9■□□□□ 0.3
ITGA8P53708 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ITGA8P53708 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.9■□□□□ 0.3
ITGA8P53708 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.9■□□□□ 0.3
ITGA8P53708 AC022532.1-201ENST00000624563 1728 ntBASIC16.9■□□□□ 0.3
ITGA8P53708 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ITGA8P53708 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ITGA8P53708 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ITGA8P53708 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
ITGA8P53708 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.89■□□□□ 0.3
ITGA8P53708 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
ITGA8P53708 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ITGA8P53708 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
ITGA8P53708 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ITGA8P53708 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ITGA8P53708 AL513477.1-201ENST00000602865 2407 ntBASIC16.89■□□□□ 0.29
ITGA8P53708 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
ITGA8P53708 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.89■□□□□ 0.29
ITGA8P53708 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ITGA8P53708 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ITGA8P53708 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ITGA8P53708 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.89■□□□□ 0.29
ITGA8P53708 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ITGA8P53708 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ITGA8P53708 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.89■□□□□ 0.29
ITGA8P53708 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.89■□□□□ 0.29
ITGA8P53708 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ITGA8P53708 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
ITGA8P53708 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.89■□□□□ 0.29
ITGA8P53708 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.89■□□□□ 0.29
ITGA8P53708 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.89■□□□□ 0.29
ITGA8P53708 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.89■□□□□ 0.29
ITGA8P53708 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ITGA8P53708 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.89■□□□□ 0.29
ITGA8P53708 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.89■□□□□ 0.29
ITGA8P53708 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.89■□□□□ 0.29
ITGA8P53708 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms