Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
RNF144AP50876 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF144AP50876 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.35■□□□□ 0.05
RNF144AP50876 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
RNF144AP50876 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RNF144AP50876 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF144AP50876 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
RNF144AP50876 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.35■□□□□ 0.05
RNF144AP50876 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RNF144AP50876 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RNF144AP50876 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
RNF144AP50876 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF144AP50876 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF144AP50876 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF144AP50876 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.35■□□□□ 0.05
RNF144AP50876 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF144AP50876 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF144AP50876 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.35■□□□□ 0.05
RNF144AP50876 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
RNF144AP50876 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.35■□□□□ 0.05
RNF144AP50876 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
RNF144AP50876 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.35■□□□□ 0.05
RNF144AP50876 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF144AP50876 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.35■□□□□ 0.05
RNF144AP50876 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.35■□□□□ 0.05
RNF144AP50876 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF144AP50876 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.35■□□□□ 0.05
RNF144AP50876 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF144AP50876 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RNF144AP50876 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF144AP50876 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF144AP50876 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
RNF144AP50876 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF144AP50876 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RNF144AP50876 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF144AP50876 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF144AP50876 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF144AP50876 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF144AP50876 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF144AP50876 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.35■□□□□ 0.05
RNF144AP50876 GGT3P-204ENST00000453783 1664 ntBASIC15.35■□□□□ 0.05
RNF144AP50876 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.35■□□□□ 0.05
RNF144AP50876 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF144AP50876 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF144AP50876 KRT8P39-201ENST00000396270 1433 ntBASIC15.34■□□□□ 0.05
RNF144AP50876 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF144AP50876 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF144AP50876 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF144AP50876 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF144AP50876 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.34■□□□□ 0.05
RNF144AP50876 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF144AP50876 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF144AP50876 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.34■□□□□ 0.05
RNF144AP50876 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF144AP50876 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
RNF144AP50876 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF144AP50876 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF144AP50876 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.34■□□□□ 0.05
RNF144AP50876 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF144AP50876 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF144AP50876 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
RNF144AP50876 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.34■□□□□ 0.05
RNF144AP50876 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
RNF144AP50876 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.34■□□□□ 0.05
RNF144AP50876 PRSS29P-201ENST00000440800 595 ntBASIC15.34■□□□□ 0.05
RNF144AP50876 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.34■□□□□ 0.05
RNF144AP50876 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.34■□□□□ 0.05
RNF144AP50876 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.34■□□□□ 0.05
RNF144AP50876 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.34■□□□□ 0.05
RNF144AP50876 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.34■□□□□ 0.05
RNF144AP50876 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF144AP50876 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF144AP50876 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF144AP50876 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF144AP50876 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF144AP50876 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
RNF144AP50876 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
RNF144AP50876 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
RNF144AP50876 BCAR1-209ENST00000546196 1340 ntBASIC15.34■□□□□ 0.05
RNF144AP50876 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF144AP50876 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.34■□□□□ 0.05
RNF144AP50876 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF144AP50876 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF144AP50876 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
RNF144AP50876 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.34■□□□□ 0.05
RNF144AP50876 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.34■□□□□ 0.05
RNF144AP50876 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF144AP50876 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF144AP50876 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF144AP50876 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.34■□□□□ 0.05
RNF144AP50876 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF144AP50876 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF144AP50876 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF144AP50876 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF144AP50876 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.34■□□□□ 0.05
RNF144AP50876 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
RNF144AP50876 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF144AP50876 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RNF144AP50876 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RNF144AP50876 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms