Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
TUBP50607 AC109322.1-201ENST00000524499 1264 ntBASIC17.35■□□□□ 0.37
TUBP50607 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.35■□□□□ 0.37
TUBP50607 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.35■□□□□ 0.37
TUBP50607 AC004449.1-201ENST00000564240 433 ntBASIC17.35■□□□□ 0.37
TUBP50607 AL355385.1-201ENST00000606123 409 ntBASIC17.35■□□□□ 0.37
TUBP50607 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TUBP50607 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.35■□□□□ 0.37
TUBP50607 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TUBP50607 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TUBP50607 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TUBP50607 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.35■□□□□ 0.37
TUBP50607 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TUBP50607 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.35■□□□□ 0.37
TUBP50607 SNX33P1-201ENST00000592116 1762 ntBASIC17.35■□□□□ 0.37
TUBP50607 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
TUBP50607 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.35■□□□□ 0.37
TUBP50607 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TUBP50607 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TUBP50607 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.35■□□□□ 0.37
TUBP50607 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TUBP50607 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TUBP50607 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TUBP50607 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TUBP50607 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.35■□□□□ 0.37
TUBP50607 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.35■□□□□ 0.37
TUBP50607 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TUBP50607 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TUBP50607 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TUBP50607 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TUBP50607 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
TUBP50607 AC132872.4-202ENST00000622924 2756 ntBASIC17.34■□□□□ 0.37
TUBP50607 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.34■□□□□ 0.37
TUBP50607 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.34■□□□□ 0.37
TUBP50607 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.34■□□□□ 0.37
TUBP50607 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBP50607 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBP50607 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.34■□□□□ 0.37
TUBP50607 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.34■□□□□ 0.37
TUBP50607 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.34■□□□□ 0.37
TUBP50607 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
TUBP50607 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TUBP50607 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBP50607 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TUBP50607 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBP50607 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.34■□□□□ 0.37
TUBP50607 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TUBP50607 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TUBP50607 MIR346-201ENST00000362234 95 ntBASIC17.34■□□□□ 0.37
TUBP50607 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.34■□□□□ 0.37
TUBP50607 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.34■□□□□ 0.37
TUBP50607 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TUBP50607 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.34■□□□□ 0.37
TUBP50607 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TUBP50607 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.34■□□□□ 0.37
TUBP50607 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TUBP50607 FAM58DP-201ENST00000428076 619 ntBASIC17.34■□□□□ 0.37
TUBP50607 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
TUBP50607 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TUBP50607 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.34■□□□□ 0.37
TUBP50607 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TUBP50607 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.34■□□□□ 0.37
TUBP50607 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TUBP50607 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.34■□□□□ 0.37
TUBP50607 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TUBP50607 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
TUBP50607 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.34■□□□□ 0.37
TUBP50607 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBP50607 AP001059.3-201ENST00000619053 235 ntBASIC17.34■□□□□ 0.37
TUBP50607 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.34■□□□□ 0.37
TUBP50607 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TUBP50607 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TUBP50607 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TUBP50607 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.33■□□□□ 0.37
TUBP50607 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TUBP50607 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TUBP50607 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TUBP50607 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TUBP50607 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TUBP50607 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TUBP50607 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TUBP50607 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.33■□□□□ 0.37
TUBP50607 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TUBP50607 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TUBP50607 GPS2P2-201ENST00000430745 888 ntBASIC17.33■□□□□ 0.36
TUBP50607 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TUBP50607 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.33■□□□□ 0.36
TUBP50607 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.33■□□□□ 0.36
TUBP50607 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TUBP50607 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.33■□□□□ 0.36
TUBP50607 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.33■□□□□ 0.36
TUBP50607 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.33■□□□□ 0.36
TUBP50607 AP000842.3-202ENST00000569238 1080 ntBASIC17.33■□□□□ 0.36
TUBP50607 AC027307.2-201ENST00000591252 911 ntBASIC17.33■□□□□ 0.36
TUBP50607 AC073389.1-201ENST00000595595 795 ntBASIC17.33■□□□□ 0.36
TUBP50607 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.33■□□□□ 0.36
TUBP50607 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.33■□□□□ 0.36
TUBP50607 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TUBP50607 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TUBP50607 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms