Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBCP0CG48 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
UBCP0CG48 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
UBCP0CG48 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.49□□□□□ -0.09
UBCP0CG48 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBCP0CG48 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
UBCP0CG48 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBCP0CG48 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.49□□□□□ -0.09
UBCP0CG48 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
UBCP0CG48 ELK2BP-201ENST00000415014 1224 ntBASIC14.49□□□□□ -0.09
UBCP0CG48 KRT18P31-201ENST00000506277 1292 ntBASIC14.49□□□□□ -0.09
UBCP0CG48 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.49□□□□□ -0.09
UBCP0CG48 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
UBCP0CG48 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.49□□□□□ -0.09
UBCP0CG48 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC14.49□□□□□ -0.09
UBCP0CG48 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.49□□□□□ -0.09
UBCP0CG48 AL603832.2-201ENST00000566195 2125 ntBASIC14.49□□□□□ -0.09
UBCP0CG48 AC020765.3-201ENST00000613051 740 ntBASIC14.49□□□□□ -0.09
UBCP0CG48 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.49□□□□□ -0.09
UBCP0CG48 GGTLC5P-201ENST00000617623 998 ntBASIC14.49□□□□□ -0.09
UBCP0CG48 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.49□□□□□ -0.09
UBCP0CG48 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBCP0CG48 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
UBCP0CG48 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
UBCP0CG48 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.49□□□□□ -0.09
UBCP0CG48 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBCP0CG48 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
UBCP0CG48 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBCP0CG48 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
UBCP0CG48 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBCP0CG48 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
UBCP0CG48 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.49□□□□□ -0.09
UBCP0CG48 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBCP0CG48 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
UBCP0CG48 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBCP0CG48 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.49□□□□□ -0.09
UBCP0CG48 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBCP0CG48 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBCP0CG48 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBCP0CG48 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBCP0CG48 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.48□□□□□ -0.09
UBCP0CG48 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
UBCP0CG48 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.48□□□□□ -0.09
UBCP0CG48 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBCP0CG48 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
UBCP0CG48 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBCP0CG48 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBCP0CG48 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
UBCP0CG48 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.48□□□□□ -0.09
UBCP0CG48 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.48□□□□□ -0.09
UBCP0CG48 AC129492.6-201ENST00000611383 1305 ntBASIC14.48□□□□□ -0.09
UBCP0CG48 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
UBCP0CG48 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBCP0CG48 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
UBCP0CG48 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBCP0CG48 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBCP0CG48 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.48□□□□□ -0.09
UBCP0CG48 PMS2P1-201ENST00000431037 1228 ntBASIC14.48□□□□□ -0.09
UBCP0CG48 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.48□□□□□ -0.09
UBCP0CG48 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.48□□□□□ -0.09
UBCP0CG48 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.48□□□□□ -0.09
UBCP0CG48 AC107918.2-201ENST00000530817 355 ntBASIC14.48□□□□□ -0.09
UBCP0CG48 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.48□□□□□ -0.09
UBCP0CG48 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.48□□□□□ -0.09
UBCP0CG48 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.48□□□□□ -0.09
UBCP0CG48 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.48□□□□□ -0.09
UBCP0CG48 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.48□□□□□ -0.09
UBCP0CG48 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
UBCP0CG48 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.48□□□□□ -0.09
UBCP0CG48 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBCP0CG48 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.48□□□□□ -0.09
UBCP0CG48 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.48□□□□□ -0.09
UBCP0CG48 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBCP0CG48 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.48□□□□□ -0.09
UBCP0CG48 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBCP0CG48 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBCP0CG48 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBCP0CG48 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.48□□□□□ -0.09
UBCP0CG48 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.48□□□□□ -0.09
UBCP0CG48 LINC02228-204ENST00000642115 2962 ntBASIC14.48□□□□□ -0.09
UBCP0CG48 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBCP0CG48 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBCP0CG48 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBCP0CG48 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBCP0CG48 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBCP0CG48 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
UBCP0CG48 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBCP0CG48 AC006504.4-201ENST00000592118 1568 ntBASIC14.47□□□□□ -0.09
UBCP0CG48 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.47□□□□□ -0.09
UBCP0CG48 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBCP0CG48 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.47□□□□□ -0.09
UBCP0CG48 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
UBCP0CG48 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
UBCP0CG48 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBCP0CG48 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
UBCP0CG48 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBCP0CG48 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
UBCP0CG48 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
UBCP0CG48 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.47□□□□□ -0.09
UBCP0CG48 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms