Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA3EO15041 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA3EO15041 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA3EO15041 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
SEMA3EO15041 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.66■□□□□ 0.74
SEMA3EO15041 AC004840.1-201ENST00000636359 365 ntBASIC19.66■□□□□ 0.74
SEMA3EO15041 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SEMA3EO15041 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SEMA3EO15041 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA3EO15041 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA3EO15041 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC19.66■□□□□ 0.74
SEMA3EO15041 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC19.66■□□□□ 0.74
SEMA3EO15041 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA3EO15041 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC19.66■□□□□ 0.74
SEMA3EO15041 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SEMA3EO15041 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA3EO15041 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA3EO15041 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SEMA3EO15041 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SEMA3EO15041 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA3EO15041 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SEMA3EO15041 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA3EO15041 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA3EO15041 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SEMA3EO15041 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.65■□□□□ 0.74
SEMA3EO15041 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
SEMA3EO15041 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.65■□□□□ 0.74
SEMA3EO15041 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
SEMA3EO15041 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA3EO15041 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA3EO15041 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA3EO15041 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA3EO15041 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC19.65■□□□□ 0.74
SEMA3EO15041 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.65■□□□□ 0.74
SEMA3EO15041 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC19.65■□□□□ 0.74
SEMA3EO15041 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19.65■□□□□ 0.74
SEMA3EO15041 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC19.65■□□□□ 0.74
SEMA3EO15041 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC19.65■□□□□ 0.74
SEMA3EO15041 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA3EO15041 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC19.65■□□□□ 0.74
SEMA3EO15041 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA3EO15041 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC19.65■□□□□ 0.74
SEMA3EO15041 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA3EO15041 AC106820.2-201ENST00000563775 3264 ntBASIC19.65■□□□□ 0.74
SEMA3EO15041 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA3EO15041 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA3EO15041 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.65■□□□□ 0.74
SEMA3EO15041 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA3EO15041 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.65■□□□□ 0.74
SEMA3EO15041 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC19.65■□□□□ 0.74
SEMA3EO15041 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA3EO15041 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA3EO15041 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA3EO15041 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.65■□□□□ 0.74
SEMA3EO15041 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA3EO15041 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
SEMA3EO15041 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.64■□□□□ 0.74
SEMA3EO15041 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SEMA3EO15041 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SEMA3EO15041 AC022211.2-201ENST00000585075 2527 ntBASIC19.64■□□□□ 0.74
SEMA3EO15041 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
SEMA3EO15041 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SEMA3EO15041 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.64■□□□□ 0.73
SEMA3EO15041 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.64■□□□□ 0.73
SEMA3EO15041 AC138932.1-201ENST00000534164 6830 ntBASIC19.64■□□□□ 0.73
SEMA3EO15041 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SEMA3EO15041 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.64■□□□□ 0.73
SEMA3EO15041 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC19.64■□□□□ 0.73
SEMA3EO15041 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.64■□□□□ 0.73
SEMA3EO15041 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.64■□□□□ 0.73
SEMA3EO15041 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.64■□□□□ 0.73
SEMA3EO15041 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.64■□□□□ 0.73
SEMA3EO15041 SPDYE22P-201ENST00000582158 798 ntBASIC19.64■□□□□ 0.73
SEMA3EO15041 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.64■□□□□ 0.73
SEMA3EO15041 AC004233.3-201ENST00000607794 1269 ntBASIC19.64■□□□□ 0.73
SEMA3EO15041 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SEMA3EO15041 MIR6069-201ENST00000620069 79 ntBASIC19.64■□□□□ 0.73
SEMA3EO15041 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC19.64■□□□□ 0.73
SEMA3EO15041 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SEMA3EO15041 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SEMA3EO15041 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SEMA3EO15041 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SEMA3EO15041 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SEMA3EO15041 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.64■□□□□ 0.73
SEMA3EO15041 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.64■□□□□ 0.73
SEMA3EO15041 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SEMA3EO15041 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SEMA3EO15041 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SEMA3EO15041 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SEMA3EO15041 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA3EO15041 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.63■□□□□ 0.73
SEMA3EO15041 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA3EO15041 UBALD1-205ENST00000590891 2641 ntBASIC19.63■□□□□ 0.73
SEMA3EO15041 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA3EO15041 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA3EO15041 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.63■□□□□ 0.73
SEMA3EO15041 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.63■□□□□ 0.73
SEMA3EO15041 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA3EO15041 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.63■□□□□ 0.73
SEMA3EO15041 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms