Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SOX1O00570 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SOX1O00570 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SOX1O00570 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SOX1O00570 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SOX1O00570 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.27■□□□□ 0.35
SOX1O00570 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
SOX1O00570 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.27■□□□□ 0.35
SOX1O00570 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SOX1O00570 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.27■□□□□ 0.35
SOX1O00570 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SOX1O00570 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX1O00570 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SOX1O00570 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX1O00570 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX1O00570 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SOX1O00570 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX1O00570 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX1O00570 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX1O00570 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SOX1O00570 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SOX1O00570 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX1O00570 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX1O00570 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX1O00570 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX1O00570 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SOX1O00570 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX1O00570 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SOX1O00570 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.26■□□□□ 0.35
SOX1O00570 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SOX1O00570 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.26■□□□□ 0.35
SOX1O00570 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SOX1O00570 AL627389.1-201ENST00000413508 1182 ntBASIC17.26■□□□□ 0.35
SOX1O00570 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.26■□□□□ 0.35
SOX1O00570 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.26■□□□□ 0.35
SOX1O00570 AL139010.1-201ENST00000454878 894 ntBASIC17.26■□□□□ 0.35
SOX1O00570 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.26■□□□□ 0.35
SOX1O00570 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC17.26■□□□□ 0.35
SOX1O00570 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.26■□□□□ 0.35
SOX1O00570 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SOX1O00570 AP000346.4-201ENST00000614827 381 ntBASIC17.26■□□□□ 0.35
SOX1O00570 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SOX1O00570 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX1O00570 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
SOX1O00570 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX1O00570 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX1O00570 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.26■□□□□ 0.35
SOX1O00570 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.26■□□□□ 0.35
SOX1O00570 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX1O00570 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SOX1O00570 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SOX1O00570 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SOX1O00570 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.25■□□□□ 0.35
SOX1O00570 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.25■□□□□ 0.35
SOX1O00570 BX323043.1-201ENST00000641006 1765 ntBASIC17.25■□□□□ 0.35
SOX1O00570 AL671710.1-201ENST00000610245 2349 ntBASIC17.25■□□□□ 0.35
SOX1O00570 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SOX1O00570 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SOX1O00570 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SOX1O00570 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.25■□□□□ 0.35
SOX1O00570 UFM1-202ENST00000379649 846 ntTSL 4 BASIC17.25■□□□□ 0.35
SOX1O00570 AC016700.1-201ENST00000429424 312 ntBASIC17.25■□□□□ 0.35
SOX1O00570 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.25■□□□□ 0.35
SOX1O00570 HOMER2P2-201ENST00000451621 847 ntBASIC17.25■□□□□ 0.35
SOX1O00570 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SOX1O00570 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SOX1O00570 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
SOX1O00570 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC17.25■□□□□ 0.35
SOX1O00570 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC17.25■□□□□ 0.35
SOX1O00570 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC17.25■□□□□ 0.35
SOX1O00570 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC17.25■□□□□ 0.35
SOX1O00570 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SOX1O00570 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.25■□□□□ 0.35
SOX1O00570 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX1O00570 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SOX1O00570 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX1O00570 AL589702.1-201ENST00000641229 1509 ntBASIC17.25■□□□□ 0.35
SOX1O00570 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX1O00570 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX1O00570 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX1O00570 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.25■□□□□ 0.35
SOX1O00570 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX1O00570 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX1O00570 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX1O00570 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX1O00570 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX1O00570 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX1O00570 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX1O00570 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SOX1O00570 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.24■□□□□ 0.35
SOX1O00570 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SOX1O00570 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SOX1O00570 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX1O00570 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.24■□□□□ 0.35
SOX1O00570 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX1O00570 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SOX1O00570 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.24■□□□□ 0.35
SOX1O00570 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
SOX1O00570 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.24■□□□□ 0.35
SOX1O00570 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms