Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.23■■□□□ 1.31
PCDHGA4Q9Y5G9 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.23■■□□□ 1.31
PCDHGA4Q9Y5G9 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGA4Q9Y5G9 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.23■■□□□ 1.31
PCDHGA4Q9Y5G9 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.23■■□□□ 1.31
PCDHGA4Q9Y5G9 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGA4Q9Y5G9 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.23■■□□□ 1.31
PCDHGA4Q9Y5G9 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHGA4Q9Y5G9 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHGA4Q9Y5G9 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHGA4Q9Y5G9 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHGA4Q9Y5G9 AC018755.3-202ENST00000596210 929 ntBASIC23.22■■□□□ 1.31
PCDHGA4Q9Y5G9 PVT1_1.1-201ENST00000615125 194 ntBASIC23.22■■□□□ 1.31
PCDHGA4Q9Y5G9 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHGA4Q9Y5G9 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGA4Q9Y5G9 GUSBP5-201ENST00000418136 578 ntBASIC23.21■■□□□ 1.31
PCDHGA4Q9Y5G9 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.21■■□□□ 1.31
PCDHGA4Q9Y5G9 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDHGA4Q9Y5G9 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.21■■□□□ 1.31
PCDHGA4Q9Y5G9 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGA4Q9Y5G9 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
PCDHGA4Q9Y5G9 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDHGA4Q9Y5G9 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGA4Q9Y5G9 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
PCDHGA4Q9Y5G9 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGA4Q9Y5G9 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGA4Q9Y5G9 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGA4Q9Y5G9 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGA4Q9Y5G9 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHGA4Q9Y5G9 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHGA4Q9Y5G9 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
PCDHGA4Q9Y5G9 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHGA4Q9Y5G9 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.19■■□□□ 1.3
PCDHGA4Q9Y5G9 THA1P-201ENST00000590384 1145 ntBASIC23.19■■□□□ 1.3
PCDHGA4Q9Y5G9 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHGA4Q9Y5G9 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGA4Q9Y5G9 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGA4Q9Y5G9 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGA4Q9Y5G9 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGA4Q9Y5G9 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGA4Q9Y5G9 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.17■■□□□ 1.3
PCDHGA4Q9Y5G9 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.17■■□□□ 1.3
PCDHGA4Q9Y5G9 MIR4508-201ENST00000584178 70 ntBASIC23.17■■□□□ 1.3
PCDHGA4Q9Y5G9 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGA4Q9Y5G9 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGA4Q9Y5G9 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
PCDHGA4Q9Y5G9 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.16■■□□□ 1.3
PCDHGA4Q9Y5G9 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHGA4Q9Y5G9 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.16■■□□□ 1.3
PCDHGA4Q9Y5G9 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.16■■□□□ 1.3
PCDHGA4Q9Y5G9 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.16■■□□□ 1.3
PCDHGA4Q9Y5G9 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.16■■□□□ 1.3
PCDHGA4Q9Y5G9 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.16■■□□□ 1.3
PCDHGA4Q9Y5G9 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGA4Q9Y5G9 AC092803.2-201ENST00000564287 1899 ntBASIC23.15■■□□□ 1.3
PCDHGA4Q9Y5G9 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.15■■□□□ 1.3
PCDHGA4Q9Y5G9 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
PCDHGA4Q9Y5G9 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDHGA4Q9Y5G9 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDHGA4Q9Y5G9 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
PCDHGA4Q9Y5G9 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
PCDHGA4Q9Y5G9 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGA4Q9Y5G9 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGA4Q9Y5G9 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGA4Q9Y5G9 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.3
PCDHGA4Q9Y5G9 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
PCDHGA4Q9Y5G9 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.14■■□□□ 1.3
PCDHGA4Q9Y5G9 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHGA4Q9Y5G9 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHGA4Q9Y5G9 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
PCDHGA4Q9Y5G9 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHGA4Q9Y5G9 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
PCDHGA4Q9Y5G9 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHGA4Q9Y5G9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHGA4Q9Y5G9 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.13■■□□□ 1.29
PCDHGA4Q9Y5G9 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
PCDHGA4Q9Y5G9 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHGA4Q9Y5G9 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHGA4Q9Y5G9 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGA4Q9Y5G9 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
PCDHGA4Q9Y5G9 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
PCDHGA4Q9Y5G9 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
PCDHGA4Q9Y5G9 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.12■■□□□ 1.29
PCDHGA4Q9Y5G9 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.12■■□□□ 1.29
PCDHGA4Q9Y5G9 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGA4Q9Y5G9 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGA4Q9Y5G9 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.12■■□□□ 1.29
PCDHGA4Q9Y5G9 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGA4Q9Y5G9 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGA4Q9Y5G9 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.12■■□□□ 1.29
PCDHGA4Q9Y5G9 AC091060.1-201ENST00000623524 1766 ntBASIC23.12■■□□□ 1.29
PCDHGA4Q9Y5G9 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHGA4Q9Y5G9 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.11■■□□□ 1.29
PCDHGA4Q9Y5G9 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHGA4Q9Y5G9 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHGA4Q9Y5G9 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
PCDHGA4Q9Y5G9 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.11■■□□□ 1.29
PCDHGA4Q9Y5G9 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHGA4Q9Y5G9 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGA4Q9Y5G9 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms