Protein–RNA interactions for Protein: Q9P0I2

EMC3, ER membrane protein complex subunit 3, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMC3Q9P0I2 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.4■■□□□ 1.02
EMC3Q9P0I2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
EMC3Q9P0I2 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
EMC3Q9P0I2 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.39■■□□□ 1.02
EMC3Q9P0I2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.39■■□□□ 1.02
EMC3Q9P0I2 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
EMC3Q9P0I2 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
EMC3Q9P0I2 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.39■■□□□ 1.01
EMC3Q9P0I2 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.39■■□□□ 1.01
EMC3Q9P0I2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
EMC3Q9P0I2 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
EMC3Q9P0I2 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
EMC3Q9P0I2 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
EMC3Q9P0I2 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
EMC3Q9P0I2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
EMC3Q9P0I2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
EMC3Q9P0I2 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
EMC3Q9P0I2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.38■■□□□ 1.01
EMC3Q9P0I2 SPCS2P3-201ENST00000500401 656 ntBASIC21.38■■□□□ 1.01
EMC3Q9P0I2 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
EMC3Q9P0I2 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
EMC3Q9P0I2 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
EMC3Q9P0I2 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
EMC3Q9P0I2 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
EMC3Q9P0I2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
EMC3Q9P0I2 AC092803.2-201ENST00000564287 1899 ntBASIC21.37■■□□□ 1.01
EMC3Q9P0I2 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
EMC3Q9P0I2 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.37■■□□□ 1.01
EMC3Q9P0I2 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.37■■□□□ 1.01
EMC3Q9P0I2 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
EMC3Q9P0I2 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.37■■□□□ 1.01
EMC3Q9P0I2 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.36■■□□□ 1.01
EMC3Q9P0I2 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
EMC3Q9P0I2 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
EMC3Q9P0I2 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.36■■□□□ 1.01
EMC3Q9P0I2 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.36■■□□□ 1.01
EMC3Q9P0I2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EMC3Q9P0I2 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.36■■□□□ 1.01
EMC3Q9P0I2 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EMC3Q9P0I2 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EMC3Q9P0I2 DUSP8P4-201ENST00000399538 1761 ntBASIC21.36■■□□□ 1.01
EMC3Q9P0I2 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
EMC3Q9P0I2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
EMC3Q9P0I2 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
EMC3Q9P0I2 DUX4L18-201ENST00000553347 1267 ntBASIC21.35■■□□□ 1.01
EMC3Q9P0I2 AL033527.3-201ENST00000566366 1196 ntBASIC21.35■■□□□ 1.01
EMC3Q9P0I2 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
EMC3Q9P0I2 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
EMC3Q9P0I2 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
EMC3Q9P0I2 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
EMC3Q9P0I2 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
EMC3Q9P0I2 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
EMC3Q9P0I2 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
EMC3Q9P0I2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.34■■□□□ 1.01
EMC3Q9P0I2 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.34■■□□□ 1.01
EMC3Q9P0I2 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
EMC3Q9P0I2 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
EMC3Q9P0I2 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
EMC3Q9P0I2 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
EMC3Q9P0I2 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.33■■□□□ 1.01
EMC3Q9P0I2 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
EMC3Q9P0I2 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
EMC3Q9P0I2 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
EMC3Q9P0I2 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
EMC3Q9P0I2 AC139795.1-202ENST00000500444 432 ntBASIC21.33■■□□□ 1.01
EMC3Q9P0I2 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
EMC3Q9P0I2 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
EMC3Q9P0I2 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
EMC3Q9P0I2 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
EMC3Q9P0I2 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.32■■□□□ 1
EMC3Q9P0I2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.32■■□□□ 1
EMC3Q9P0I2 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
EMC3Q9P0I2 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
EMC3Q9P0I2 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
EMC3Q9P0I2 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
EMC3Q9P0I2 AC010501.1-201ENST00000606270 1962 ntBASIC21.31■■□□□ 1
EMC3Q9P0I2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.31■■□□□ 1
EMC3Q9P0I2 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.31■■□□□ 1
EMC3Q9P0I2 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.31■■□□□ 1
EMC3Q9P0I2 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
EMC3Q9P0I2 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.31■■□□□ 1
EMC3Q9P0I2 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.31■■□□□ 1
EMC3Q9P0I2 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
EMC3Q9P0I2 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
EMC3Q9P0I2 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
EMC3Q9P0I2 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.3■■□□□ 1
EMC3Q9P0I2 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.3■■□□□ 1
EMC3Q9P0I2 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
EMC3Q9P0I2 BHLHE23-202ENST00000612929 1109 ntBASIC21.3■■□□□ 1
EMC3Q9P0I2 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
EMC3Q9P0I2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
EMC3Q9P0I2 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.29■■□□□ 1
EMC3Q9P0I2 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.29■■□□□ 1
EMC3Q9P0I2 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.29■■□□□ 1
EMC3Q9P0I2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
EMC3Q9P0I2 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
EMC3Q9P0I2 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
EMC3Q9P0I2 RPS2P7-201ENST00000447334 885 ntBASIC21.29■■□□□ 1
EMC3Q9P0I2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.29■■□□□ 1
EMC3Q9P0I2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms