Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.9■■□□□ 1.9
PDLIM7Q9NR12 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.9■■□□□ 1.9
PDLIM7Q9NR12 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PDLIM7Q9NR12 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
PDLIM7Q9NR12 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
PDLIM7Q9NR12 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC26.89■■□□□ 1.9
PDLIM7Q9NR12 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC26.89■■□□□ 1.9
PDLIM7Q9NR12 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.89■■□□□ 1.9
PDLIM7Q9NR12 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
PDLIM7Q9NR12 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC26.88■■□□□ 1.89
PDLIM7Q9NR12 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PDLIM7Q9NR12 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PDLIM7Q9NR12 AC131281.2-201ENST00000520478 145 ntBASIC26.88■■□□□ 1.89
PDLIM7Q9NR12 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.88■■□□□ 1.89
PDLIM7Q9NR12 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PDLIM7Q9NR12 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC26.88■■□□□ 1.89
PDLIM7Q9NR12 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PDLIM7Q9NR12 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PDLIM7Q9NR12 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
PDLIM7Q9NR12 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PDLIM7Q9NR12 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC26.87■■□□□ 1.89
PDLIM7Q9NR12 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
PDLIM7Q9NR12 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
PDLIM7Q9NR12 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.86■■□□□ 1.89
PDLIM7Q9NR12 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PDLIM7Q9NR12 KRT18P24-201ENST00000344739 1156 ntBASIC26.86■■□□□ 1.89
PDLIM7Q9NR12 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC26.86■■□□□ 1.89
PDLIM7Q9NR12 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PDLIM7Q9NR12 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PDLIM7Q9NR12 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
PDLIM7Q9NR12 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.86■■□□□ 1.89
PDLIM7Q9NR12 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC26.85■■□□□ 1.89
PDLIM7Q9NR12 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.85■■□□□ 1.89
PDLIM7Q9NR12 AC137630.3-201ENST00000607245 391 ntBASIC26.85■■□□□ 1.89
PDLIM7Q9NR12 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.85■■□□□ 1.89
PDLIM7Q9NR12 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PDLIM7Q9NR12 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.85■■□□□ 1.89
PDLIM7Q9NR12 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.85■■□□□ 1.89
PDLIM7Q9NR12 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PDLIM7Q9NR12 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC26.84■■□□□ 1.89
PDLIM7Q9NR12 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
PDLIM7Q9NR12 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PDLIM7Q9NR12 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
PDLIM7Q9NR12 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC26.84■■□□□ 1.89
PDLIM7Q9NR12 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PDLIM7Q9NR12 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC26.83■■□□□ 1.89
PDLIM7Q9NR12 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.83■■□□□ 1.89
PDLIM7Q9NR12 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC26.83■■□□□ 1.89
PDLIM7Q9NR12 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
PDLIM7Q9NR12 AC021242.3-201ENST00000607598 1377 ntBASIC26.83■■□□□ 1.88
PDLIM7Q9NR12 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.82■■□□□ 1.88
PDLIM7Q9NR12 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PDLIM7Q9NR12 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC26.82■■□□□ 1.88
PDLIM7Q9NR12 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC26.82■■□□□ 1.88
PDLIM7Q9NR12 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
PDLIM7Q9NR12 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PDLIM7Q9NR12 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.81■■□□□ 1.88
PDLIM7Q9NR12 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.81■■□□□ 1.88
PDLIM7Q9NR12 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
PDLIM7Q9NR12 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PDLIM7Q9NR12 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
PDLIM7Q9NR12 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
PDLIM7Q9NR12 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
PDLIM7Q9NR12 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC26.8■■□□□ 1.88
PDLIM7Q9NR12 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PDLIM7Q9NR12 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PDLIM7Q9NR12 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
PDLIM7Q9NR12 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC26.79■■□□□ 1.88
PDLIM7Q9NR12 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
PDLIM7Q9NR12 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.79■■□□□ 1.88
PDLIM7Q9NR12 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.79■■□□□ 1.88
PDLIM7Q9NR12 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
PDLIM7Q9NR12 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
PDLIM7Q9NR12 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.79■■□□□ 1.88
PDLIM7Q9NR12 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
PDLIM7Q9NR12 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC26.78■■□□□ 1.88
PDLIM7Q9NR12 AL136116.3-201ENST00000402907 1138 ntBASIC26.78■■□□□ 1.88
PDLIM7Q9NR12 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC26.78■■□□□ 1.88
PDLIM7Q9NR12 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
PDLIM7Q9NR12 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
PDLIM7Q9NR12 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
PDLIM7Q9NR12 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
PDLIM7Q9NR12 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.77■■□□□ 1.88
PDLIM7Q9NR12 AC110285.6-201ENST00000617652 491 ntBASIC26.77■■□□□ 1.88
PDLIM7Q9NR12 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.76■■□□□ 1.87
PDLIM7Q9NR12 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
PDLIM7Q9NR12 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.76■■□□□ 1.87
PDLIM7Q9NR12 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
PDLIM7Q9NR12 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
PDLIM7Q9NR12 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.75■■□□□ 1.87
PDLIM7Q9NR12 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC26.75■■□□□ 1.87
PDLIM7Q9NR12 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC26.75■■□□□ 1.87
PDLIM7Q9NR12 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC26.75■■□□□ 1.87
PDLIM7Q9NR12 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.75■■□□□ 1.87
PDLIM7Q9NR12 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
PDLIM7Q9NR12 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
PDLIM7Q9NR12 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
PDLIM7Q9NR12 AC120024.1-201ENST00000562672 995 ntBASIC26.74■■□□□ 1.87
PDLIM7Q9NR12 AC092028.1-203ENST00000608262 953 ntBASIC26.74■■□□□ 1.87
PDLIM7Q9NR12 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms