Protein–RNA interactions for Protein: Q9H0Q0

FAM49A, Protein FAM49A, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49AQ9H0Q0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.31■■□□□ 1.8
FAM49AQ9H0Q0 GRAMD4P7-201ENST00000578182 1232 ntBASIC26.31■■□□□ 1.8
FAM49AQ9H0Q0 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
FAM49AQ9H0Q0 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
FAM49AQ9H0Q0 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC26.3■■□□□ 1.8
FAM49AQ9H0Q0 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.3■■□□□ 1.8
FAM49AQ9H0Q0 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
FAM49AQ9H0Q0 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
FAM49AQ9H0Q0 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
FAM49AQ9H0Q0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.29■■□□□ 1.8
FAM49AQ9H0Q0 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
FAM49AQ9H0Q0 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
FAM49AQ9H0Q0 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
FAM49AQ9H0Q0 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC26.29■■□□□ 1.8
FAM49AQ9H0Q0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
FAM49AQ9H0Q0 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
FAM49AQ9H0Q0 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
FAM49AQ9H0Q0 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
FAM49AQ9H0Q0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.28■■□□□ 1.8
FAM49AQ9H0Q0 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
FAM49AQ9H0Q0 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
FAM49AQ9H0Q0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
FAM49AQ9H0Q0 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC26.28■■□□□ 1.8
FAM49AQ9H0Q0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC26.28■■□□□ 1.8
FAM49AQ9H0Q0 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
FAM49AQ9H0Q0 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.28■■□□□ 1.8
FAM49AQ9H0Q0 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
FAM49AQ9H0Q0 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
FAM49AQ9H0Q0 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
FAM49AQ9H0Q0 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
FAM49AQ9H0Q0 MTURN-203ENST00000409688 843 ntTSL 2 BASIC26.27■■□□□ 1.8
FAM49AQ9H0Q0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
FAM49AQ9H0Q0 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC26.27■■□□□ 1.8
FAM49AQ9H0Q0 AC137630.3-201ENST00000607245 391 ntBASIC26.27■■□□□ 1.8
FAM49AQ9H0Q0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC26.27■■□□□ 1.8
FAM49AQ9H0Q0 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
FAM49AQ9H0Q0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
FAM49AQ9H0Q0 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
FAM49AQ9H0Q0 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
FAM49AQ9H0Q0 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
FAM49AQ9H0Q0 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
FAM49AQ9H0Q0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
FAM49AQ9H0Q0 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
FAM49AQ9H0Q0 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
FAM49AQ9H0Q0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
FAM49AQ9H0Q0 UNC93B8-201ENST00000511903 705 ntBASIC26.26■■□□□ 1.79
FAM49AQ9H0Q0 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
FAM49AQ9H0Q0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.25■■□□□ 1.79
FAM49AQ9H0Q0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC26.25■■□□□ 1.79
FAM49AQ9H0Q0 TSPY9P-201ENST00000440215 945 ntBASIC26.25■■□□□ 1.79
FAM49AQ9H0Q0 TSPY11P-201ENST00000442607 1045 ntBASIC26.25■■□□□ 1.79
FAM49AQ9H0Q0 MIR4281-201ENST00000580852 62 ntBASIC26.25■■□□□ 1.79
FAM49AQ9H0Q0 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
FAM49AQ9H0Q0 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.25■■□□□ 1.79
FAM49AQ9H0Q0 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.24■■□□□ 1.79
FAM49AQ9H0Q0 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.24■■□□□ 1.79
FAM49AQ9H0Q0 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
FAM49AQ9H0Q0 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
FAM49AQ9H0Q0 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
FAM49AQ9H0Q0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
FAM49AQ9H0Q0 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.23■■□□□ 1.79
FAM49AQ9H0Q0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC26.23■■□□□ 1.79
FAM49AQ9H0Q0 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
FAM49AQ9H0Q0 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
FAM49AQ9H0Q0 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
FAM49AQ9H0Q0 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
FAM49AQ9H0Q0 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
FAM49AQ9H0Q0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
FAM49AQ9H0Q0 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.22■■□□□ 1.79
FAM49AQ9H0Q0 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC26.22■■□□□ 1.79
FAM49AQ9H0Q0 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC26.22■■□□□ 1.79
FAM49AQ9H0Q0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.22■■□□□ 1.79
FAM49AQ9H0Q0 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
FAM49AQ9H0Q0 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
FAM49AQ9H0Q0 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
FAM49AQ9H0Q0 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
FAM49AQ9H0Q0 AC021242.3-201ENST00000607598 1377 ntBASIC26.21■■□□□ 1.79
FAM49AQ9H0Q0 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC26.21■■□□□ 1.79
FAM49AQ9H0Q0 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
FAM49AQ9H0Q0 KRT16P3-201ENST00000439127 1283 ntBASIC26.21■■□□□ 1.79
FAM49AQ9H0Q0 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC26.21■■□□□ 1.79
FAM49AQ9H0Q0 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
FAM49AQ9H0Q0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC26.2■■□□□ 1.78
FAM49AQ9H0Q0 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC26.2■■□□□ 1.78
FAM49AQ9H0Q0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC26.2■■□□□ 1.78
FAM49AQ9H0Q0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC26.2■■□□□ 1.78
FAM49AQ9H0Q0 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
FAM49AQ9H0Q0 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
FAM49AQ9H0Q0 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC26.19■■□□□ 1.78
FAM49AQ9H0Q0 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
FAM49AQ9H0Q0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC26.19■■□□□ 1.78
FAM49AQ9H0Q0 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
FAM49AQ9H0Q0 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
FAM49AQ9H0Q0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC26.18■■□□□ 1.78
FAM49AQ9H0Q0 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC26.18■■□□□ 1.78
FAM49AQ9H0Q0 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC26.18■■□□□ 1.78
FAM49AQ9H0Q0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
FAM49AQ9H0Q0 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
FAM49AQ9H0Q0 ERN1-208ENST00000606895 2068 ntBASIC26.18■■□□□ 1.78
FAM49AQ9H0Q0 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms