Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC12.55□□□□□ -0.4
KRTAP4-1Q9BYQ7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
KRTAP4-1Q9BYQ7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
KRTAP4-1Q9BYQ7 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
KRTAP4-1Q9BYQ7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC12.55□□□□□ -0.4
KRTAP4-1Q9BYQ7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC12.55□□□□□ -0.4
KRTAP4-1Q9BYQ7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC12.55□□□□□ -0.4
KRTAP4-1Q9BYQ7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
KRTAP4-1Q9BYQ7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
KRTAP4-1Q9BYQ7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
KRTAP4-1Q9BYQ7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KRTAP4-1Q9BYQ7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KRTAP4-1Q9BYQ7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC12.54□□□□□ -0.4
KRTAP4-1Q9BYQ7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC12.54□□□□□ -0.4
KRTAP4-1Q9BYQ7 AC010997.5-201ENST00000609182 354 ntBASIC12.54□□□□□ -0.4
KRTAP4-1Q9BYQ7 RASSF1-AS1-201ENST00000629828 790 ntBASIC12.54□□□□□ -0.4
KRTAP4-1Q9BYQ7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
KRTAP4-1Q9BYQ7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
KRTAP4-1Q9BYQ7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
KRTAP4-1Q9BYQ7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC12.53□□□□□ -0.4
KRTAP4-1Q9BYQ7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KRTAP4-1Q9BYQ7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
KRTAP4-1Q9BYQ7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KRTAP4-1Q9BYQ7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
KRTAP4-1Q9BYQ7 AC096631.2-201ENST00000436136 790 ntBASIC12.53□□□□□ -0.4
KRTAP4-1Q9BYQ7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC12.53□□□□□ -0.4
KRTAP4-1Q9BYQ7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
KRTAP4-1Q9BYQ7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KRTAP4-1Q9BYQ7 AL512631.2-201ENST00000604634 923 ntBASIC12.53□□□□□ -0.4
KRTAP4-1Q9BYQ7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC12.53□□□□□ -0.4
KRTAP4-1Q9BYQ7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
KRTAP4-1Q9BYQ7 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KRTAP4-1Q9BYQ7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
KRTAP4-1Q9BYQ7 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC12.52□□□□□ -0.4
KRTAP4-1Q9BYQ7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
KRTAP4-1Q9BYQ7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
KRTAP4-1Q9BYQ7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
KRTAP4-1Q9BYQ7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
KRTAP4-1Q9BYQ7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC12.52□□□□□ -0.41
KRTAP4-1Q9BYQ7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC12.52□□□□□ -0.41
KRTAP4-1Q9BYQ7 AC005837.3-201ENST00000612163 286 ntBASIC12.52□□□□□ -0.41
KRTAP4-1Q9BYQ7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC12.52□□□□□ -0.41
KRTAP4-1Q9BYQ7 AP004609.3-201ENST00000610705 1884 ntBASIC12.52□□□□□ -0.41
KRTAP4-1Q9BYQ7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
KRTAP4-1Q9BYQ7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KRTAP4-1Q9BYQ7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC12.51□□□□□ -0.41
KRTAP4-1Q9BYQ7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
KRTAP4-1Q9BYQ7 MIR6724-1-201ENST00000616420 92 ntBASIC12.51□□□□□ -0.41
KRTAP4-1Q9BYQ7 MIR6724-2-201ENST00000616483 92 ntBASIC12.51□□□□□ -0.41
KRTAP4-1Q9BYQ7 MIR6724-4-201ENST00000617390 92 ntBASIC12.51□□□□□ -0.41
KRTAP4-1Q9BYQ7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
KRTAP4-1Q9BYQ7 MIR6724-3-201ENST00000622482 92 ntBASIC12.51□□□□□ -0.41
KRTAP4-1Q9BYQ7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
KRTAP4-1Q9BYQ7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KRTAP4-1Q9BYQ7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KRTAP4-1Q9BYQ7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
KRTAP4-1Q9BYQ7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC12.51□□□□□ -0.41
KRTAP4-1Q9BYQ7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC12.5□□□□□ -0.41
KRTAP4-1Q9BYQ7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KRTAP4-1Q9BYQ7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC12.5□□□□□ -0.41
KRTAP4-1Q9BYQ7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
KRTAP4-1Q9BYQ7 GAK-223ENST00000628912 497 ntTSL 5 BASIC12.5□□□□□ -0.41
KRTAP4-1Q9BYQ7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
KRTAP4-1Q9BYQ7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
KRTAP4-1Q9BYQ7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
KRTAP4-1Q9BYQ7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
KRTAP4-1Q9BYQ7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KRTAP4-1Q9BYQ7 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC12.5□□□□□ -0.41
KRTAP4-1Q9BYQ7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
KRTAP4-1Q9BYQ7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC12.49□□□□□ -0.41
KRTAP4-1Q9BYQ7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
KRTAP4-1Q9BYQ7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
KRTAP4-1Q9BYQ7 AF131216.4-201ENST00000638924 1588 ntBASIC12.49□□□□□ -0.41
KRTAP4-1Q9BYQ7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
KRTAP4-1Q9BYQ7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
KRTAP4-1Q9BYQ7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
KRTAP4-1Q9BYQ7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC12.49□□□□□ -0.41
KRTAP4-1Q9BYQ7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC12.49□□□□□ -0.41
KRTAP4-1Q9BYQ7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC12.49□□□□□ -0.41
KRTAP4-1Q9BYQ7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
KRTAP4-1Q9BYQ7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
KRTAP4-1Q9BYQ7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
KRTAP4-1Q9BYQ7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
KRTAP4-1Q9BYQ7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC12.48□□□□□ -0.41
KRTAP4-1Q9BYQ7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
KRTAP4-1Q9BYQ7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC12.48□□□□□ -0.41
KRTAP4-1Q9BYQ7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC12.48□□□□□ -0.41
KRTAP4-1Q9BYQ7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
KRTAP4-1Q9BYQ7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC12.48□□□□□ -0.41
KRTAP4-1Q9BYQ7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC12.48□□□□□ -0.41
KRTAP4-1Q9BYQ7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC12.48□□□□□ -0.41
KRTAP4-1Q9BYQ7 MTDHP2-201ENST00000601468 714 ntBASIC12.48□□□□□ -0.41
KRTAP4-1Q9BYQ7 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
KRTAP4-1Q9BYQ7 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
KRTAP4-1Q9BYQ7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
KRTAP4-1Q9BYQ7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
KRTAP4-1Q9BYQ7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
KRTAP4-1Q9BYQ7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC12.47□□□□□ -0.41
KRTAP4-1Q9BYQ7 ZNRF2P3-201ENST00000424200 374 ntBASIC12.47□□□□□ -0.41
KRTAP4-1Q9BYQ7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms