Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TM9SF2Q99805 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
TM9SF2Q99805 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TM9SF2Q99805 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TM9SF2Q99805 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TM9SF2Q99805 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.78■■□□□ 1.08
TM9SF2Q99805 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TM9SF2Q99805 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
TM9SF2Q99805 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TM9SF2Q99805 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TM9SF2Q99805 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.78■■□□□ 1.08
TM9SF2Q99805 AC018755.3-202ENST00000596210 929 ntBASIC21.78■■□□□ 1.08
TM9SF2Q99805 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
TM9SF2Q99805 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TM9SF2Q99805 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TM9SF2Q99805 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TM9SF2Q99805 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TM9SF2Q99805 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TM9SF2Q99805 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TM9SF2Q99805 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TM9SF2Q99805 MIR6765-201ENST00000614092 87 ntBASIC21.77■■□□□ 1.08
TM9SF2Q99805 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TM9SF2Q99805 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
TM9SF2Q99805 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TM9SF2Q99805 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
TM9SF2Q99805 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TM9SF2Q99805 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TM9SF2Q99805 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
TM9SF2Q99805 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TM9SF2Q99805 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
TM9SF2Q99805 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.76■■□□□ 1.07
TM9SF2Q99805 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TM9SF2Q99805 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.75■■□□□ 1.07
TM9SF2Q99805 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TM9SF2Q99805 AC142472.1-201ENST00000612013 1741 ntBASIC21.75■■□□□ 1.07
TM9SF2Q99805 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
TM9SF2Q99805 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TM9SF2Q99805 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TM9SF2Q99805 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.75■■□□□ 1.07
TM9SF2Q99805 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TM9SF2Q99805 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TM9SF2Q99805 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TM9SF2Q99805 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TM9SF2Q99805 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
TM9SF2Q99805 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TM9SF2Q99805 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
TM9SF2Q99805 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TM9SF2Q99805 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TM9SF2Q99805 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
TM9SF2Q99805 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.74■■□□□ 1.07
TM9SF2Q99805 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
TM9SF2Q99805 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TM9SF2Q99805 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TM9SF2Q99805 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TM9SF2Q99805 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TM9SF2Q99805 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.73■■□□□ 1.07
TM9SF2Q99805 SPCS2P3-201ENST00000500401 656 ntBASIC21.73■■□□□ 1.07
TM9SF2Q99805 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.73■■□□□ 1.07
TM9SF2Q99805 BHLHE23-202ENST00000612929 1109 ntBASIC21.73■■□□□ 1.07
TM9SF2Q99805 AC074183.2-201ENST00000623112 922 ntBASIC21.73■■□□□ 1.07
TM9SF2Q99805 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
TM9SF2Q99805 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
TM9SF2Q99805 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TM9SF2Q99805 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TM9SF2Q99805 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.73■■□□□ 1.07
TM9SF2Q99805 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TM9SF2Q99805 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TM9SF2Q99805 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TM9SF2Q99805 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TM9SF2Q99805 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.72■■□□□ 1.07
TM9SF2Q99805 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TM9SF2Q99805 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.72■■□□□ 1.07
TM9SF2Q99805 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TM9SF2Q99805 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.72■■□□□ 1.07
TM9SF2Q99805 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.72■■□□□ 1.07
TM9SF2Q99805 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TM9SF2Q99805 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TM9SF2Q99805 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.72■■□□□ 1.07
TM9SF2Q99805 AC139795.1-202ENST00000500444 432 ntBASIC21.71■■□□□ 1.07
TM9SF2Q99805 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.71■■□□□ 1.07
TM9SF2Q99805 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.71■■□□□ 1.07
TM9SF2Q99805 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
TM9SF2Q99805 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TM9SF2Q99805 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
TM9SF2Q99805 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TM9SF2Q99805 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TM9SF2Q99805 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.7■■□□□ 1.07
TM9SF2Q99805 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
TM9SF2Q99805 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TM9SF2Q99805 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TM9SF2Q99805 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
TM9SF2Q99805 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.7■■□□□ 1.06
TM9SF2Q99805 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TM9SF2Q99805 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TM9SF2Q99805 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.69■■□□□ 1.06
TM9SF2Q99805 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.69■■□□□ 1.06
TM9SF2Q99805 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
TM9SF2Q99805 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
TM9SF2Q99805 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TM9SF2Q99805 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms