Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SPENQ96T58 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
SPENQ96T58 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SPENQ96T58 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
SPENQ96T58 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
SPENQ96T58 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SPENQ96T58 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SPENQ96T58 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SPENQ96T58 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SPENQ96T58 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SPENQ96T58 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SPENQ96T58 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SPENQ96T58 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SPENQ96T58 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.75■■□□□ 1.07
SPENQ96T58 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.75■■□□□ 1.07
SPENQ96T58 AC133561.4-201ENST00000566112 224 ntBASIC21.75■■□□□ 1.07
SPENQ96T58 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SPENQ96T58 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SPENQ96T58 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SPENQ96T58 AC026271.2-201ENST00000428091 497 ntBASIC21.74■■□□□ 1.07
SPENQ96T58 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SPENQ96T58 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
SPENQ96T58 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.74■■□□□ 1.07
SPENQ96T58 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SPENQ96T58 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
SPENQ96T58 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
SPENQ96T58 AC092666.2-201ENST00000613287 246 ntBASIC21.73■■□□□ 1.07
SPENQ96T58 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SPENQ96T58 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
SPENQ96T58 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SPENQ96T58 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.73■■□□□ 1.07
SPENQ96T58 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SPENQ96T58 AC135279.3-201ENST00000610945 1311 ntBASIC21.72■■□□□ 1.07
SPENQ96T58 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.72■■□□□ 1.07
SPENQ96T58 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.71■■□□□ 1.07
SPENQ96T58 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SPENQ96T58 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SPENQ96T58 MIR4281-201ENST00000580852 62 ntBASIC21.71■■□□□ 1.07
SPENQ96T58 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.71■■□□□ 1.07
SPENQ96T58 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SPENQ96T58 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SPENQ96T58 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
SPENQ96T58 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.71■■□□□ 1.07
SPENQ96T58 MIR3621-201ENST00000580529 85 ntBASIC21.71■■□□□ 1.07
SPENQ96T58 AF131216.4-201ENST00000638924 1588 ntBASIC21.71■■□□□ 1.07
SPENQ96T58 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
SPENQ96T58 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SPENQ96T58 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.7■■□□□ 1.06
SPENQ96T58 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.7■■□□□ 1.06
SPENQ96T58 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.7■■□□□ 1.06
SPENQ96T58 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.7■■□□□ 1.06
SPENQ96T58 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SPENQ96T58 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SPENQ96T58 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SPENQ96T58 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.69■■□□□ 1.06
SPENQ96T58 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.69■■□□□ 1.06
SPENQ96T58 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SPENQ96T58 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
SPENQ96T58 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SPENQ96T58 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SPENQ96T58 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SPENQ96T58 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SPENQ96T58 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
SPENQ96T58 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
SPENQ96T58 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SPENQ96T58 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SPENQ96T58 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SPENQ96T58 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SPENQ96T58 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.67■■□□□ 1.06
SPENQ96T58 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SPENQ96T58 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.67■■□□□ 1.06
SPENQ96T58 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SPENQ96T58 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SPENQ96T58 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
SPENQ96T58 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SPENQ96T58 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SPENQ96T58 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPENQ96T58 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.66■■□□□ 1.06
SPENQ96T58 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPENQ96T58 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.66■■□□□ 1.06
SPENQ96T58 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.65■■□□□ 1.06
SPENQ96T58 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.65■■□□□ 1.06
SPENQ96T58 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.65■■□□□ 1.06
SPENQ96T58 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPENQ96T58 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.65■■□□□ 1.06
SPENQ96T58 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.65■■□□□ 1.06
SPENQ96T58 AC011551.1-201ENST00000614101 683 ntBASIC21.65■■□□□ 1.06
SPENQ96T58 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.65■■□□□ 1.06
SPENQ96T58 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SPENQ96T58 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.64■■□□□ 1.05
SPENQ96T58 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.64■■□□□ 1.05
SPENQ96T58 AC106739.1-201ENST00000617035 715 ntBASIC21.64■■□□□ 1.05
SPENQ96T58 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPENQ96T58 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SPENQ96T58 SUDS3P1-201ENST00000505831 966 ntBASIC21.62■■□□□ 1.05
SPENQ96T58 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SPENQ96T58 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SPENQ96T58 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SPENQ96T58 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.62■■□□□ 1.05
SPENQ96T58 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms