Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC31.77■■■□□ 2.68
NBPF4Q96M43 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC31.77■■■□□ 2.68
NBPF4Q96M43 AC092028.1-203ENST00000608262 953 ntBASIC31.77■■■□□ 2.68
NBPF4Q96M43 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC31.76■■■□□ 2.67
NBPF4Q96M43 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC31.76■■■□□ 2.67
NBPF4Q96M43 SHF-206ENST00000560471 2499 ntTSL 5 BASIC31.76■■■□□ 2.67
NBPF4Q96M43 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.67
NBPF4Q96M43 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC31.75■■■□□ 2.67
NBPF4Q96M43 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
NBPF4Q96M43 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC31.73■■■□□ 2.67
NBPF4Q96M43 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
NBPF4Q96M43 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC31.72■■■□□ 2.67
NBPF4Q96M43 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
NBPF4Q96M43 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC31.71■■■□□ 2.67
NBPF4Q96M43 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC31.71■■■□□ 2.67
NBPF4Q96M43 SNAI3-AS1-204ENST00000567997 2048 ntBASIC31.7■■■□□ 2.67
NBPF4Q96M43 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC31.7■■■□□ 2.67
NBPF4Q96M43 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC31.7■■■□□ 2.67
NBPF4Q96M43 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
NBPF4Q96M43 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
NBPF4Q96M43 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
NBPF4Q96M43 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC31.69■■■□□ 2.66
NBPF4Q96M43 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC31.69■■■□□ 2.66
NBPF4Q96M43 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC31.68■■■□□ 2.66
NBPF4Q96M43 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC31.67■■■□□ 2.66
NBPF4Q96M43 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
NBPF4Q96M43 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC31.67■■■□□ 2.66
NBPF4Q96M43 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC31.67■■■□□ 2.66
NBPF4Q96M43 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC31.67■■■□□ 2.66
NBPF4Q96M43 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC31.67■■■□□ 2.66
NBPF4Q96M43 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
NBPF4Q96M43 SENP5-202ENST00000419026 973 ntTSL 3 BASIC31.66■■■□□ 2.66
NBPF4Q96M43 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC31.66■■■□□ 2.66
NBPF4Q96M43 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC31.65■■■□□ 2.66
NBPF4Q96M43 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC31.65■■■□□ 2.66
NBPF4Q96M43 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
NBPF4Q96M43 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC31.65■■■□□ 2.66
NBPF4Q96M43 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
NBPF4Q96M43 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC31.65■■■□□ 2.66
NBPF4Q96M43 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
NBPF4Q96M43 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
NBPF4Q96M43 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC31.64■■■□□ 2.66
NBPF4Q96M43 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
NBPF4Q96M43 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
NBPF4Q96M43 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC31.64■■■□□ 2.66
NBPF4Q96M43 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC31.64■■■□□ 2.66
NBPF4Q96M43 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC31.64■■■□□ 2.65
NBPF4Q96M43 AC131281.2-201ENST00000520478 145 ntBASIC31.63■■■□□ 2.65
NBPF4Q96M43 TRIR-202ENST00000588213 841 ntTSL 3 BASIC31.63■■■□□ 2.65
NBPF4Q96M43 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC31.63■■■□□ 2.65
NBPF4Q96M43 GAK-223ENST00000628912 497 ntTSL 5 BASIC31.63■■■□□ 2.65
NBPF4Q96M43 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
NBPF4Q96M43 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
NBPF4Q96M43 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC31.62■■■□□ 2.65
NBPF4Q96M43 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
NBPF4Q96M43 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
NBPF4Q96M43 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
NBPF4Q96M43 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
NBPF4Q96M43 AC011551.1-201ENST00000614101 683 ntBASIC31.61■■■□□ 2.65
NBPF4Q96M43 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
NBPF4Q96M43 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC31.61■■■□□ 2.65
NBPF4Q96M43 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
NBPF4Q96M43 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC31.6■■■□□ 2.65
NBPF4Q96M43 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC31.6■■■□□ 2.65
NBPF4Q96M43 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC31.59■■■□□ 2.65
NBPF4Q96M43 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
NBPF4Q96M43 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC31.59■■■□□ 2.65
NBPF4Q96M43 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC31.59■■■□□ 2.65
NBPF4Q96M43 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC31.59■■■□□ 2.65
NBPF4Q96M43 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC31.59■■■□□ 2.65
NBPF4Q96M43 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC31.59■■■□□ 2.65
NBPF4Q96M43 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC31.59■■■□□ 2.65
NBPF4Q96M43 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC31.58■■■□□ 2.65
NBPF4Q96M43 RPP21-222ENST00000433076 577 ntTSL 2 BASIC31.58■■■□□ 2.65
NBPF4Q96M43 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC31.58■■■□□ 2.65
NBPF4Q96M43 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC31.58■■■□□ 2.65
NBPF4Q96M43 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
NBPF4Q96M43 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
NBPF4Q96M43 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC31.58■■■□□ 2.65
NBPF4Q96M43 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC31.58■■■□□ 2.65
NBPF4Q96M43 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
NBPF4Q96M43 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC31.57■■■□□ 2.64
NBPF4Q96M43 AC010997.5-201ENST00000609182 354 ntBASIC31.57■■■□□ 2.64
NBPF4Q96M43 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
NBPF4Q96M43 LSM4-201ENST00000252816 986 ntTSL 2 BASIC31.56■■■□□ 2.64
NBPF4Q96M43 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC31.56■■■□□ 2.64
NBPF4Q96M43 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC31.56■■■□□ 2.64
NBPF4Q96M43 SRR-208ENST00000576848 588 ntTSL 4 BASIC31.56■■■□□ 2.64
NBPF4Q96M43 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC31.56■■■□□ 2.64
NBPF4Q96M43 AL117332.1-201ENST00000622628 974 ntBASIC31.56■■■□□ 2.64
NBPF4Q96M43 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
NBPF4Q96M43 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC31.55■■■□□ 2.64
NBPF4Q96M43 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
NBPF4Q96M43 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC31.55■■■□□ 2.64
NBPF4Q96M43 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
NBPF4Q96M43 MIR638-201ENST00000385237 100 ntBASIC31.55■■■□□ 2.64
NBPF4Q96M43 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC31.55■■■□□ 2.64
NBPF4Q96M43 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC31.55■■■□□ 2.64
NBPF4Q96M43 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
NBPF4Q96M43 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms