Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.3■□□□□ 0.84
SMIM4Q8WVI0 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM4Q8WVI0 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM4Q8WVI0 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.29■□□□□ 0.84
SMIM4Q8WVI0 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM4Q8WVI0 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM4Q8WVI0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM4Q8WVI0 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMIM4Q8WVI0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMIM4Q8WVI0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMIM4Q8WVI0 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SMIM4Q8WVI0 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMIM4Q8WVI0 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.28■□□□□ 0.84
SMIM4Q8WVI0 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SMIM4Q8WVI0 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMIM4Q8WVI0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SMIM4Q8WVI0 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMIM4Q8WVI0 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.28■□□□□ 0.84
SMIM4Q8WVI0 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.28■□□□□ 0.84
SMIM4Q8WVI0 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMIM4Q8WVI0 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMIM4Q8WVI0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMIM4Q8WVI0 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SMIM4Q8WVI0 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMIM4Q8WVI0 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SMIM4Q8WVI0 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMIM4Q8WVI0 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
SMIM4Q8WVI0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMIM4Q8WVI0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.27■□□□□ 0.84
SMIM4Q8WVI0 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.27■□□□□ 0.83
SMIM4Q8WVI0 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SMIM4Q8WVI0 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMIM4Q8WVI0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMIM4Q8WVI0 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMIM4Q8WVI0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMIM4Q8WVI0 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMIM4Q8WVI0 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SMIM4Q8WVI0 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SMIM4Q8WVI0 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMIM4Q8WVI0 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMIM4Q8WVI0 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMIM4Q8WVI0 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SMIM4Q8WVI0 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
SMIM4Q8WVI0 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMIM4Q8WVI0 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMIM4Q8WVI0 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMIM4Q8WVI0 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SMIM4Q8WVI0 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
SMIM4Q8WVI0 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SMIM4Q8WVI0 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMIM4Q8WVI0 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SMIM4Q8WVI0 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SMIM4Q8WVI0 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMIM4Q8WVI0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SMIM4Q8WVI0 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SMIM4Q8WVI0 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SMIM4Q8WVI0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMIM4Q8WVI0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
SMIM4Q8WVI0 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMIM4Q8WVI0 C9orf163-202ENST00000624034 2573 ntBASIC20.24■□□□□ 0.83
SMIM4Q8WVI0 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMIM4Q8WVI0 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMIM4Q8WVI0 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMIM4Q8WVI0 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.24■□□□□ 0.83
SMIM4Q8WVI0 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.24■□□□□ 0.83
SMIM4Q8WVI0 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMIM4Q8WVI0 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SMIM4Q8WVI0 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.23■□□□□ 0.83
SMIM4Q8WVI0 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SMIM4Q8WVI0 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SMIM4Q8WVI0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.23■□□□□ 0.83
SMIM4Q8WVI0 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMIM4Q8WVI0 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SMIM4Q8WVI0 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.23■□□□□ 0.83
SMIM4Q8WVI0 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMIM4Q8WVI0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
SMIM4Q8WVI0 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMIM4Q8WVI0 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.22■□□□□ 0.83
SMIM4Q8WVI0 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMIM4Q8WVI0 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SMIM4Q8WVI0 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SMIM4Q8WVI0 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.21■□□□□ 0.83
SMIM4Q8WVI0 ABCB10P4-201ENST00000566803 2184 ntBASIC20.21■□□□□ 0.83
SMIM4Q8WVI0 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.21■□□□□ 0.83
SMIM4Q8WVI0 SUZ12P1-203ENST00000578195 985 ntBASIC20.21■□□□□ 0.83
SMIM4Q8WVI0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMIM4Q8WVI0 AL117328.2-201ENST00000624617 1940 ntBASIC20.21■□□□□ 0.83
SMIM4Q8WVI0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.21■□□□□ 0.83
SMIM4Q8WVI0 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMIM4Q8WVI0 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SMIM4Q8WVI0 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SMIM4Q8WVI0 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SMIM4Q8WVI0 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMIM4Q8WVI0 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMIM4Q8WVI0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMIM4Q8WVI0 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMIM4Q8WVI0 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMIM4Q8WVI0 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.19■□□□□ 0.82
SMIM4Q8WVI0 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SMIM4Q8WVI0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms