Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRAM1L1Q8N609 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
TRAM1L1Q8N609 PVT1_1.1-201ENST00000615125 194 ntBASIC23.61■■□□□ 1.37
TRAM1L1Q8N609 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRAM1L1Q8N609 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23.6■■□□□ 1.37
TRAM1L1Q8N609 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TRAM1L1Q8N609 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRAM1L1Q8N609 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRAM1L1Q8N609 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRAM1L1Q8N609 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
TRAM1L1Q8N609 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRAM1L1Q8N609 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.59■■□□□ 1.37
TRAM1L1Q8N609 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRAM1L1Q8N609 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TRAM1L1Q8N609 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.59■■□□□ 1.37
TRAM1L1Q8N609 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRAM1L1Q8N609 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TRAM1L1Q8N609 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRAM1L1Q8N609 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TRAM1L1Q8N609 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TRAM1L1Q8N609 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.58■■□□□ 1.37
TRAM1L1Q8N609 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
TRAM1L1Q8N609 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
TRAM1L1Q8N609 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
TRAM1L1Q8N609 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRAM1L1Q8N609 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.57■■□□□ 1.36
TRAM1L1Q8N609 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRAM1L1Q8N609 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRAM1L1Q8N609 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
TRAM1L1Q8N609 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.56■■□□□ 1.36
TRAM1L1Q8N609 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRAM1L1Q8N609 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRAM1L1Q8N609 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.56■■□□□ 1.36
TRAM1L1Q8N609 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRAM1L1Q8N609 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TRAM1L1Q8N609 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TRAM1L1Q8N609 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.54■■□□□ 1.36
TRAM1L1Q8N609 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TRAM1L1Q8N609 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRAM1L1Q8N609 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRAM1L1Q8N609 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRAM1L1Q8N609 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRAM1L1Q8N609 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.53■■□□□ 1.36
TRAM1L1Q8N609 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRAM1L1Q8N609 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRAM1L1Q8N609 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRAM1L1Q8N609 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TRAM1L1Q8N609 AL592295.1-201ENST00000400984 884 ntBASIC23.52■■□□□ 1.36
TRAM1L1Q8N609 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.52■■□□□ 1.36
TRAM1L1Q8N609 MIR4508-201ENST00000584178 70 ntBASIC23.52■■□□□ 1.36
TRAM1L1Q8N609 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.52■■□□□ 1.36
TRAM1L1Q8N609 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.51■■□□□ 1.35
TRAM1L1Q8N609 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.51■■□□□ 1.35
TRAM1L1Q8N609 AC022616.5-201ENST00000518796 181 ntBASIC23.51■■□□□ 1.35
TRAM1L1Q8N609 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRAM1L1Q8N609 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
TRAM1L1Q8N609 FOXO3B-201ENST00000395675 1928 ntBASIC23.51■■□□□ 1.35
TRAM1L1Q8N609 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRAM1L1Q8N609 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRAM1L1Q8N609 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRAM1L1Q8N609 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.5■■□□□ 1.35
TRAM1L1Q8N609 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TRAM1L1Q8N609 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
TRAM1L1Q8N609 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
TRAM1L1Q8N609 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRAM1L1Q8N609 AC103834.1-201ENST00000520383 144 ntBASIC23.5■■□□□ 1.35
TRAM1L1Q8N609 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.5■■□□□ 1.35
TRAM1L1Q8N609 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.5■■□□□ 1.35
TRAM1L1Q8N609 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
TRAM1L1Q8N609 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRAM1L1Q8N609 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRAM1L1Q8N609 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TRAM1L1Q8N609 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
TRAM1L1Q8N609 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRAM1L1Q8N609 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.49■■□□□ 1.35
TRAM1L1Q8N609 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TRAM1L1Q8N609 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRAM1L1Q8N609 KRT8P33-201ENST00000508125 1423 ntBASIC23.49■■□□□ 1.35
TRAM1L1Q8N609 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TRAM1L1Q8N609 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.49■■□□□ 1.35
TRAM1L1Q8N609 YBX1P4-201ENST00000392794 808 ntBASIC23.48■■□□□ 1.35
TRAM1L1Q8N609 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
TRAM1L1Q8N609 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.48■■□□□ 1.35
TRAM1L1Q8N609 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.48■■□□□ 1.35
TRAM1L1Q8N609 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.48■■□□□ 1.35
TRAM1L1Q8N609 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.48■■□□□ 1.35
TRAM1L1Q8N609 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRAM1L1Q8N609 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRAM1L1Q8N609 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRAM1L1Q8N609 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
TRAM1L1Q8N609 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
TRAM1L1Q8N609 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.46■■□□□ 1.35
TRAM1L1Q8N609 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRAM1L1Q8N609 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.46■■□□□ 1.35
TRAM1L1Q8N609 RARRES2P1-201ENST00000474487 481 ntBASIC23.46■■□□□ 1.35
TRAM1L1Q8N609 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.46■■□□□ 1.35
TRAM1L1Q8N609 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.46■■□□□ 1.35
TRAM1L1Q8N609 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
TRAM1L1Q8N609 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
TRAM1L1Q8N609 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.44■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms