Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
TRIM50Q86XT4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
TRIM50Q86XT4 Z92544.1-202ENST00000571933 1220 ntBASIC26.64■■□□□ 1.86
TRIM50Q86XT4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
TRIM50Q86XT4 CREM-229ENST00000474362 1030 ntTSL 2 BASIC26.63■■□□□ 1.85
TRIM50Q86XT4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
TRIM50Q86XT4 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
TRIM50Q86XT4 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
TRIM50Q86XT4 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC26.62■■□□□ 1.85
TRIM50Q86XT4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.61■■□□□ 1.85
TRIM50Q86XT4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
TRIM50Q86XT4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
TRIM50Q86XT4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
TRIM50Q86XT4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.61■■□□□ 1.85
TRIM50Q86XT4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
TRIM50Q86XT4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
TRIM50Q86XT4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
TRIM50Q86XT4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.6■■□□□ 1.85
TRIM50Q86XT4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
TRIM50Q86XT4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
TRIM50Q86XT4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
TRIM50Q86XT4 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC26.59■■□□□ 1.85
TRIM50Q86XT4 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
TRIM50Q86XT4 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
TRIM50Q86XT4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.59■■□□□ 1.85
TRIM50Q86XT4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC26.59■■□□□ 1.85
TRIM50Q86XT4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
TRIM50Q86XT4 ERN1-208ENST00000606895 2068 ntBASIC26.59■■□□□ 1.85
TRIM50Q86XT4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
TRIM50Q86XT4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
TRIM50Q86XT4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
TRIM50Q86XT4 BX664725.1-201ENST00000438252 379 ntBASIC26.58■■□□□ 1.85
TRIM50Q86XT4 MIR4787-201ENST00000607364 84 ntBASIC26.58■■□□□ 1.85
TRIM50Q86XT4 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
TRIM50Q86XT4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
TRIM50Q86XT4 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
TRIM50Q86XT4 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TRIM50Q86XT4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TRIM50Q86XT4 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC26.57■■□□□ 1.84
TRIM50Q86XT4 AL592295.1-201ENST00000400984 884 ntBASIC26.57■■□□□ 1.84
TRIM50Q86XT4 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC26.57■■□□□ 1.84
TRIM50Q86XT4 KRT125P-201ENST00000546827 989 ntBASIC26.57■■□□□ 1.84
TRIM50Q86XT4 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
TRIM50Q86XT4 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
TRIM50Q86XT4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TRIM50Q86XT4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TRIM50Q86XT4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
TRIM50Q86XT4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC26.55■■□□□ 1.84
TRIM50Q86XT4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TRIM50Q86XT4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TRIM50Q86XT4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.54■■□□□ 1.84
TRIM50Q86XT4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
TRIM50Q86XT4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TRIM50Q86XT4 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TRIM50Q86XT4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
TRIM50Q86XT4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC26.53■■□□□ 1.84
TRIM50Q86XT4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC26.53■■□□□ 1.84
TRIM50Q86XT4 MIR4281-201ENST00000580852 62 ntBASIC26.53■■□□□ 1.84
TRIM50Q86XT4 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TRIM50Q86XT4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC26.53■■□□□ 1.84
TRIM50Q86XT4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TRIM50Q86XT4 AC096887.2-201ENST00000623443 1957 ntBASIC26.53■■□□□ 1.84
TRIM50Q86XT4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TRIM50Q86XT4 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
TRIM50Q86XT4 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TRIM50Q86XT4 UNC93B8-201ENST00000511903 705 ntBASIC26.52■■□□□ 1.84
TRIM50Q86XT4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
TRIM50Q86XT4 GRAMD4P7-201ENST00000578182 1232 ntBASIC26.52■■□□□ 1.84
TRIM50Q86XT4 AC137630.3-201ENST00000607245 391 ntBASIC26.52■■□□□ 1.84
TRIM50Q86XT4 AL121749.1-202ENST00000609313 2153 ntBASIC26.52■■□□□ 1.84
TRIM50Q86XT4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.84
TRIM50Q86XT4 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
TRIM50Q86XT4 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
TRIM50Q86XT4 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
TRIM50Q86XT4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26.51■■□□□ 1.83
TRIM50Q86XT4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
TRIM50Q86XT4 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TRIM50Q86XT4 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
TRIM50Q86XT4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
TRIM50Q86XT4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.51■■□□□ 1.83
TRIM50Q86XT4 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
TRIM50Q86XT4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TRIM50Q86XT4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC26.5■■□□□ 1.83
TRIM50Q86XT4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.5■■□□□ 1.83
TRIM50Q86XT4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC26.5■■□□□ 1.83
TRIM50Q86XT4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC26.5■■□□□ 1.83
TRIM50Q86XT4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC26.5■■□□□ 1.83
TRIM50Q86XT4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.49■■□□□ 1.83
TRIM50Q86XT4 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TRIM50Q86XT4 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TRIM50Q86XT4 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
TRIM50Q86XT4 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
TRIM50Q86XT4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.49■■□□□ 1.83
TRIM50Q86XT4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TRIM50Q86XT4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
TRIM50Q86XT4 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TRIM50Q86XT4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TRIM50Q86XT4 AC021242.3-201ENST00000607598 1377 ntBASIC26.48■■□□□ 1.83
TRIM50Q86XT4 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TRIM50Q86XT4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms