Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
ZC3HC1Q86WB0 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ZC3HC1Q86WB0 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
ZC3HC1Q86WB0 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.63■■□□□ 1.37
ZC3HC1Q86WB0 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
ZC3HC1Q86WB0 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.62■■□□□ 1.37
ZC3HC1Q86WB0 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
ZC3HC1Q86WB0 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.62■■□□□ 1.37
ZC3HC1Q86WB0 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
ZC3HC1Q86WB0 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
ZC3HC1Q86WB0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
ZC3HC1Q86WB0 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
ZC3HC1Q86WB0 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
ZC3HC1Q86WB0 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
ZC3HC1Q86WB0 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.61■■□□□ 1.37
ZC3HC1Q86WB0 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.61■■□□□ 1.37
ZC3HC1Q86WB0 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.61■■□□□ 1.37
ZC3HC1Q86WB0 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.61■■□□□ 1.37
ZC3HC1Q86WB0 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
ZC3HC1Q86WB0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.61■■□□□ 1.37
ZC3HC1Q86WB0 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.6■■□□□ 1.37
ZC3HC1Q86WB0 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.6■■□□□ 1.37
ZC3HC1Q86WB0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.6■■□□□ 1.37
ZC3HC1Q86WB0 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
ZC3HC1Q86WB0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
ZC3HC1Q86WB0 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
ZC3HC1Q86WB0 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.6■■□□□ 1.37
ZC3HC1Q86WB0 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
ZC3HC1Q86WB0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
ZC3HC1Q86WB0 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.59■■□□□ 1.37
ZC3HC1Q86WB0 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
ZC3HC1Q86WB0 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
ZC3HC1Q86WB0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.59■■□□□ 1.37
ZC3HC1Q86WB0 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.59■■□□□ 1.37
ZC3HC1Q86WB0 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
ZC3HC1Q86WB0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.59■■□□□ 1.37
ZC3HC1Q86WB0 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
ZC3HC1Q86WB0 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
ZC3HC1Q86WB0 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
ZC3HC1Q86WB0 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
ZC3HC1Q86WB0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.58■■□□□ 1.37
ZC3HC1Q86WB0 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
ZC3HC1Q86WB0 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
ZC3HC1Q86WB0 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
ZC3HC1Q86WB0 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.58■■□□□ 1.37
ZC3HC1Q86WB0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
ZC3HC1Q86WB0 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
ZC3HC1Q86WB0 LINC01124-201ENST00000409786 2117 ntBASIC23.57■■□□□ 1.36
ZC3HC1Q86WB0 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.57■■□□□ 1.36
ZC3HC1Q86WB0 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ZC3HC1Q86WB0 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.57■■□□□ 1.36
ZC3HC1Q86WB0 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ZC3HC1Q86WB0 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.57■■□□□ 1.36
ZC3HC1Q86WB0 GPX1-201ENST00000419349 1106 ntBASIC23.57■■□□□ 1.36
ZC3HC1Q86WB0 RAP2CP1-202ENST00000605179 643 ntBASIC23.57■■□□□ 1.36
ZC3HC1Q86WB0 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ZC3HC1Q86WB0 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.57■■□□□ 1.36
ZC3HC1Q86WB0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ZC3HC1Q86WB0 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
ZC3HC1Q86WB0 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ZC3HC1Q86WB0 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ZC3HC1Q86WB0 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.56■■□□□ 1.36
ZC3HC1Q86WB0 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.56■■□□□ 1.36
ZC3HC1Q86WB0 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
ZC3HC1Q86WB0 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.56■■□□□ 1.36
ZC3HC1Q86WB0 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ZC3HC1Q86WB0 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ZC3HC1Q86WB0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
ZC3HC1Q86WB0 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
ZC3HC1Q86WB0 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
ZC3HC1Q86WB0 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
ZC3HC1Q86WB0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.55■■□□□ 1.36
ZC3HC1Q86WB0 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
ZC3HC1Q86WB0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
ZC3HC1Q86WB0 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
ZC3HC1Q86WB0 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.54■■□□□ 1.36
ZC3HC1Q86WB0 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.54■■□□□ 1.36
ZC3HC1Q86WB0 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.54■■□□□ 1.36
ZC3HC1Q86WB0 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.54■■□□□ 1.36
ZC3HC1Q86WB0 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
ZC3HC1Q86WB0 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.54■■□□□ 1.36
ZC3HC1Q86WB0 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ZC3HC1Q86WB0 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ZC3HC1Q86WB0 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ZC3HC1Q86WB0 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.53■■□□□ 1.36
ZC3HC1Q86WB0 AC026202.3-201ENST00000600805 1127 ntBASIC23.53■■□□□ 1.36
ZC3HC1Q86WB0 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ZC3HC1Q86WB0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ZC3HC1Q86WB0 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ZC3HC1Q86WB0 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ZC3HC1Q86WB0 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ZC3HC1Q86WB0 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
ZC3HC1Q86WB0 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ZC3HC1Q86WB0 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
ZC3HC1Q86WB0 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
ZC3HC1Q86WB0 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ZC3HC1Q86WB0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
ZC3HC1Q86WB0 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
ZC3HC1Q86WB0 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
ZC3HC1Q86WB0 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms