Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 EDA-201ENST00000338901 1233 ntBASIC24.96■■□□□ 1.59
PTCRAQ6ISU1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24.96■■□□□ 1.59
PTCRAQ6ISU1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
PTCRAQ6ISU1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
PTCRAQ6ISU1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
PTCRAQ6ISU1 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC24.96■■□□□ 1.59
PTCRAQ6ISU1 AL355001.2-201ENST00000620617 1191 ntBASIC24.96■■□□□ 1.59
PTCRAQ6ISU1 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC24.96■■□□□ 1.59
PTCRAQ6ISU1 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PTCRAQ6ISU1 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC24.95■■□□□ 1.58
PTCRAQ6ISU1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC24.95■■□□□ 1.58
PTCRAQ6ISU1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC24.95■■□□□ 1.58
PTCRAQ6ISU1 AC011551.1-201ENST00000614101 683 ntBASIC24.95■■□□□ 1.58
PTCRAQ6ISU1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
PTCRAQ6ISU1 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.94■■□□□ 1.58
PTCRAQ6ISU1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PTCRAQ6ISU1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
PTCRAQ6ISU1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC24.94■■□□□ 1.58
PTCRAQ6ISU1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC24.94■■□□□ 1.58
PTCRAQ6ISU1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC24.94■■□□□ 1.58
PTCRAQ6ISU1 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PTCRAQ6ISU1 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PTCRAQ6ISU1 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.93■■□□□ 1.58
PTCRAQ6ISU1 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PTCRAQ6ISU1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
PTCRAQ6ISU1 GLI3-203ENST00000437480 451 ntTSL 2 BASIC24.93■■□□□ 1.58
PTCRAQ6ISU1 MIR6821-201ENST00000617625 74 ntBASIC24.93■■□□□ 1.58
PTCRAQ6ISU1 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
PTCRAQ6ISU1 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.93■■□□□ 1.58
PTCRAQ6ISU1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
PTCRAQ6ISU1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
PTCRAQ6ISU1 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC24.92■■□□□ 1.58
PTCRAQ6ISU1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PTCRAQ6ISU1 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PTCRAQ6ISU1 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PTCRAQ6ISU1 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PTCRAQ6ISU1 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PTCRAQ6ISU1 AC024257.2-201ENST00000549699 147 ntBASIC24.91■■□□□ 1.58
PTCRAQ6ISU1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PTCRAQ6ISU1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC24.9■■□□□ 1.58
PTCRAQ6ISU1 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PTCRAQ6ISU1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
PTCRAQ6ISU1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PTCRAQ6ISU1 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC24.9■■□□□ 1.58
PTCRAQ6ISU1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
PTCRAQ6ISU1 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
PTCRAQ6ISU1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC24.89■■□□□ 1.58
PTCRAQ6ISU1 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
PTCRAQ6ISU1 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
PTCRAQ6ISU1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PTCRAQ6ISU1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PTCRAQ6ISU1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PTCRAQ6ISU1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
PTCRAQ6ISU1 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC24.87■■□□□ 1.57
PTCRAQ6ISU1 AC097381.1-201ENST00000429019 1296 ntBASIC24.87■■□□□ 1.57
PTCRAQ6ISU1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.87■■□□□ 1.57
PTCRAQ6ISU1 AL162430.1-201ENST00000480705 870 ntBASIC24.87■■□□□ 1.57
PTCRAQ6ISU1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC24.87■■□□□ 1.57
PTCRAQ6ISU1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
PTCRAQ6ISU1 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PTCRAQ6ISU1 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PTCRAQ6ISU1 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC24.86■■□□□ 1.57
PTCRAQ6ISU1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC24.86■■□□□ 1.57
PTCRAQ6ISU1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PTCRAQ6ISU1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PTCRAQ6ISU1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PTCRAQ6ISU1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC24.86■■□□□ 1.57
PTCRAQ6ISU1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PTCRAQ6ISU1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC24.86■■□□□ 1.57
PTCRAQ6ISU1 AL136967.2-201ENST00000623968 743 ntBASIC24.86■■□□□ 1.57
PTCRAQ6ISU1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.86■■□□□ 1.57
PTCRAQ6ISU1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
PTCRAQ6ISU1 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.85■■□□□ 1.57
PTCRAQ6ISU1 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PTCRAQ6ISU1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PTCRAQ6ISU1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
PTCRAQ6ISU1 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
PTCRAQ6ISU1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC24.84■■□□□ 1.57
PTCRAQ6ISU1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.84■■□□□ 1.57
PTCRAQ6ISU1 AF213884.3-201ENST00000563833 479 ntBASIC24.84■■□□□ 1.57
PTCRAQ6ISU1 AC087623.3-201ENST00000607047 1098 ntBASIC24.84■■□□□ 1.57
PTCRAQ6ISU1 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
PTCRAQ6ISU1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
PTCRAQ6ISU1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PTCRAQ6ISU1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.57
PTCRAQ6ISU1 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
PTCRAQ6ISU1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PTCRAQ6ISU1 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC24.82■■□□□ 1.56
PTCRAQ6ISU1 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PTCRAQ6ISU1 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
PTCRAQ6ISU1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
PTCRAQ6ISU1 SRD5A1P1-201ENST00000442297 786 ntBASIC24.82■■□□□ 1.56
PTCRAQ6ISU1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
PTCRAQ6ISU1 GRAMD4P4-201ENST00000613563 1115 ntBASIC24.82■■□□□ 1.56
PTCRAQ6ISU1 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PTCRAQ6ISU1 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC24.81■■□□□ 1.56
PTCRAQ6ISU1 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PTCRAQ6ISU1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
PTCRAQ6ISU1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC24.81■■□□□ 1.56
PTCRAQ6ISU1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms