Protein–RNA interactions for Protein: Q5VTD9

GFI1B, Zinc finger protein Gfi-1b, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1BQ5VTD9 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
GFI1BQ5VTD9 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GFI1BQ5VTD9 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
GFI1BQ5VTD9 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GFI1BQ5VTD9 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
GFI1BQ5VTD9 LINC00565-201ENST00000562710 2331 ntBASIC18.38■□□□□ 0.53
GFI1BQ5VTD9 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GFI1BQ5VTD9 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GFI1BQ5VTD9 AC022211.4-201ENST00000625094 2161 ntBASIC18.38■□□□□ 0.53
GFI1BQ5VTD9 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
GFI1BQ5VTD9 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC18.38■□□□□ 0.53
GFI1BQ5VTD9 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GFI1BQ5VTD9 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GFI1BQ5VTD9 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GFI1BQ5VTD9 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GFI1BQ5VTD9 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GFI1BQ5VTD9 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
GFI1BQ5VTD9 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GFI1BQ5VTD9 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
GFI1BQ5VTD9 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
GFI1BQ5VTD9 C9orf163-202ENST00000624034 2573 ntBASIC18.37■□□□□ 0.53
GFI1BQ5VTD9 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
GFI1BQ5VTD9 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GFI1BQ5VTD9 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GFI1BQ5VTD9 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GFI1BQ5VTD9 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
GFI1BQ5VTD9 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GFI1BQ5VTD9 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
GFI1BQ5VTD9 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GFI1BQ5VTD9 LINC01971-201ENST00000617888 1048 ntBASIC18.36■□□□□ 0.53
GFI1BQ5VTD9 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
GFI1BQ5VTD9 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GFI1BQ5VTD9 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GFI1BQ5VTD9 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.35■□□□□ 0.53
GFI1BQ5VTD9 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GFI1BQ5VTD9 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.35■□□□□ 0.53
GFI1BQ5VTD9 AC097639.1-201ENST00000565519 1891 ntBASIC18.35■□□□□ 0.53
GFI1BQ5VTD9 DUSP8P5-201ENST00000422884 1815 ntBASIC18.35■□□□□ 0.53
GFI1BQ5VTD9 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GFI1BQ5VTD9 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
GFI1BQ5VTD9 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GFI1BQ5VTD9 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC18.35■□□□□ 0.53
GFI1BQ5VTD9 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
GFI1BQ5VTD9 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GFI1BQ5VTD9 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GFI1BQ5VTD9 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.35■□□□□ 0.53
GFI1BQ5VTD9 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC18.34■□□□□ 0.53
GFI1BQ5VTD9 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.34■□□□□ 0.53
GFI1BQ5VTD9 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
GFI1BQ5VTD9 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC18.34■□□□□ 0.53
GFI1BQ5VTD9 CHML-204ENST00000638121 920 ntTSL 2 BASIC18.34■□□□□ 0.53
GFI1BQ5VTD9 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
GFI1BQ5VTD9 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.34■□□□□ 0.53
GFI1BQ5VTD9 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GFI1BQ5VTD9 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GFI1BQ5VTD9 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
GFI1BQ5VTD9 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GFI1BQ5VTD9 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
GFI1BQ5VTD9 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.33■□□□□ 0.52
GFI1BQ5VTD9 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GFI1BQ5VTD9 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
GFI1BQ5VTD9 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GFI1BQ5VTD9 RPS2-210ENST00000530225 765 ntTSL 2 BASIC18.32■□□□□ 0.52
GFI1BQ5VTD9 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.32■□□□□ 0.52
GFI1BQ5VTD9 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
GFI1BQ5VTD9 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
GFI1BQ5VTD9 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.32■□□□□ 0.52
GFI1BQ5VTD9 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
GFI1BQ5VTD9 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GFI1BQ5VTD9 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
GFI1BQ5VTD9 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC18.31■□□□□ 0.52
GFI1BQ5VTD9 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.31■□□□□ 0.52
GFI1BQ5VTD9 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GFI1BQ5VTD9 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GFI1BQ5VTD9 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GFI1BQ5VTD9 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GFI1BQ5VTD9 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GFI1BQ5VTD9 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GFI1BQ5VTD9 AL117328.2-201ENST00000624617 1940 ntBASIC18.3■□□□□ 0.52
GFI1BQ5VTD9 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GFI1BQ5VTD9 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.3■□□□□ 0.52
GFI1BQ5VTD9 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC18.3■□□□□ 0.52
GFI1BQ5VTD9 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GFI1BQ5VTD9 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.3■□□□□ 0.52
GFI1BQ5VTD9 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.3■□□□□ 0.52
GFI1BQ5VTD9 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
GFI1BQ5VTD9 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
GFI1BQ5VTD9 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.3■□□□□ 0.52
GFI1BQ5VTD9 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GFI1BQ5VTD9 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
GFI1BQ5VTD9 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GFI1BQ5VTD9 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
GFI1BQ5VTD9 DUX4L13-201ENST00000554103 1267 ntBASIC18.29■□□□□ 0.52
GFI1BQ5VTD9 DUX4L15-201ENST00000611059 1267 ntBASIC18.29■□□□□ 0.52
GFI1BQ5VTD9 DUX4L23-201ENST00000615195 1269 ntBASIC18.29■□□□□ 0.52
GFI1BQ5VTD9 DUX4L24-201ENST00000617576 1269 ntBASIC18.29■□□□□ 0.52
GFI1BQ5VTD9 DUX4L22-201ENST00000618238 1269 ntBASIC18.29■□□□□ 0.52
GFI1BQ5VTD9 DUX4L20-201ENST00000619712 1269 ntBASIC18.29■□□□□ 0.52
GFI1BQ5VTD9 DUX4L21-201ENST00000622058 1269 ntBASIC18.29■□□□□ 0.52
GFI1BQ5VTD9 DUX4L10-201ENST00000622460 1267 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms