Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.8■■□□□ 1.08
PER3P56645 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
PER3P56645 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PER3P56645 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.8■■□□□ 1.08
PER3P56645 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.8■■□□□ 1.08
PER3P56645 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PER3P56645 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.8■■□□□ 1.08
PER3P56645 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PER3P56645 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.8■■□□□ 1.08
PER3P56645 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
PER3P56645 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PER3P56645 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PER3P56645 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
PER3P56645 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PER3P56645 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
PER3P56645 AC087393.1-201ENST00000582896 145 ntBASIC21.78■■□□□ 1.08
PER3P56645 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PER3P56645 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.78■■□□□ 1.08
PER3P56645 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PER3P56645 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PER3P56645 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PER3P56645 BX664725.1-201ENST00000438252 379 ntBASIC21.77■■□□□ 1.08
PER3P56645 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.77■■□□□ 1.08
PER3P56645 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.77■■□□□ 1.08
PER3P56645 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PER3P56645 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PER3P56645 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PER3P56645 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.76■■□□□ 1.07
PER3P56645 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.76■■□□□ 1.07
PER3P56645 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.76■■□□□ 1.07
PER3P56645 AC093323.1-202ENST00000635031 2045 ntBASIC21.76■■□□□ 1.07
PER3P56645 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PER3P56645 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.76■■□□□ 1.07
PER3P56645 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PER3P56645 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
PER3P56645 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.75■■□□□ 1.07
PER3P56645 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PER3P56645 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
PER3P56645 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PER3P56645 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PER3P56645 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PER3P56645 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.74■■□□□ 1.07
PER3P56645 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
PER3P56645 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.74■■□□□ 1.07
PER3P56645 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PER3P56645 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PER3P56645 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PER3P56645 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.73■■□□□ 1.07
PER3P56645 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.73■■□□□ 1.07
PER3P56645 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PER3P56645 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.73■■□□□ 1.07
PER3P56645 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PER3P56645 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PER3P56645 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PER3P56645 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
PER3P56645 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PER3P56645 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PER3P56645 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PER3P56645 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PER3P56645 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.71■■□□□ 1.07
PER3P56645 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PER3P56645 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PER3P56645 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PER3P56645 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.71■■□□□ 1.07
PER3P56645 MIR4787-201ENST00000607364 84 ntBASIC21.71■■□□□ 1.07
PER3P56645 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PER3P56645 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PER3P56645 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.7■■□□□ 1.06
PER3P56645 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PER3P56645 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.7■■□□□ 1.06
PER3P56645 RPS2P7-201ENST00000447334 885 ntBASIC21.7■■□□□ 1.06
PER3P56645 AC022616.5-201ENST00000518796 181 ntBASIC21.7■■□□□ 1.06
PER3P56645 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.7■■□□□ 1.06
PER3P56645 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.7■■□□□ 1.06
PER3P56645 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PER3P56645 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PER3P56645 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PER3P56645 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PER3P56645 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
PER3P56645 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PER3P56645 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PER3P56645 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.69■■□□□ 1.06
PER3P56645 KRT18P10-201ENST00000388836 1287 ntBASIC21.69■■□□□ 1.06
PER3P56645 KRT16P3-201ENST00000439127 1283 ntBASIC21.69■■□□□ 1.06
PER3P56645 LONRF2P2-201ENST00000439212 571 ntBASIC21.69■■□□□ 1.06
PER3P56645 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.69■■□□□ 1.06
PER3P56645 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.69■■□□□ 1.06
PER3P56645 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PER3P56645 BX255925.1-201ENST00000566954 1854 ntBASIC21.69■■□□□ 1.06
PER3P56645 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PER3P56645 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PER3P56645 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PER3P56645 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
PER3P56645 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.68■■□□□ 1.06
PER3P56645 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PER3P56645 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
PER3P56645 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PER3P56645 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.67■■□□□ 1.06
PER3P56645 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
PER3P56645 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms