Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CLCNKAP51800 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CLCNKAP51800 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.33■■□□□ 1.33
CLCNKAP51800 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CLCNKAP51800 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.33■■□□□ 1.33
CLCNKAP51800 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
CLCNKAP51800 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.33■■□□□ 1.33
CLCNKAP51800 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.33■■□□□ 1.33
CLCNKAP51800 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.33■■□□□ 1.33
CLCNKAP51800 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
CLCNKAP51800 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CLCNKAP51800 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.32■■□□□ 1.32
CLCNKAP51800 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CLCNKAP51800 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
CLCNKAP51800 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CLCNKAP51800 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
CLCNKAP51800 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.32■■□□□ 1.32
CLCNKAP51800 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
CLCNKAP51800 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CLCNKAP51800 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLCNKAP51800 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLCNKAP51800 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.31■■□□□ 1.32
CLCNKAP51800 AC103724.3-201ENST00000564481 992 ntBASIC23.31■■□□□ 1.32
CLCNKAP51800 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLCNKAP51800 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.31■■□□□ 1.32
CLCNKAP51800 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLCNKAP51800 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.3■■□□□ 1.32
CLCNKAP51800 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CLCNKAP51800 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLCNKAP51800 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
CLCNKAP51800 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLCNKAP51800 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.3■■□□□ 1.32
CLCNKAP51800 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLCNKAP51800 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
CLCNKAP51800 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
CLCNKAP51800 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CLCNKAP51800 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLCNKAP51800 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CLCNKAP51800 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
CLCNKAP51800 AL451085.2-201ENST00000605085 799 ntBASIC23.29■■□□□ 1.32
CLCNKAP51800 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLCNKAP51800 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.29■■□□□ 1.32
CLCNKAP51800 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CLCNKAP51800 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLCNKAP51800 DUSP8P4-201ENST00000399538 1761 ntBASIC23.28■■□□□ 1.32
CLCNKAP51800 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLCNKAP51800 AL592295.1-201ENST00000400984 884 ntBASIC23.28■■□□□ 1.32
CLCNKAP51800 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CLCNKAP51800 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.28■■□□□ 1.32
CLCNKAP51800 AC145676.1-201ENST00000514988 2004 ntBASIC23.28■■□□□ 1.32
CLCNKAP51800 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLCNKAP51800 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.27■■□□□ 1.32
CLCNKAP51800 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CLCNKAP51800 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.26■■□□□ 1.31
CLCNKAP51800 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CLCNKAP51800 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.26■■□□□ 1.31
CLCNKAP51800 AL031848.2-201ENST00000607670 837 ntBASIC23.26■■□□□ 1.31
CLCNKAP51800 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
CLCNKAP51800 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLCNKAP51800 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
CLCNKAP51800 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CLCNKAP51800 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CLCNKAP51800 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CLCNKAP51800 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
CLCNKAP51800 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CLCNKAP51800 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.25■■□□□ 1.31
CLCNKAP51800 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.25■■□□□ 1.31
CLCNKAP51800 AC097639.1-201ENST00000565519 1891 ntBASIC23.25■■□□□ 1.31
CLCNKAP51800 KRT18P24-201ENST00000344739 1156 ntBASIC23.24■■□□□ 1.31
CLCNKAP51800 AL035685.1-201ENST00000636663 812 ntBASIC23.24■■□□□ 1.31
CLCNKAP51800 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
CLCNKAP51800 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
CLCNKAP51800 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.23■■□□□ 1.31
CLCNKAP51800 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLCNKAP51800 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CLCNKAP51800 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
CLCNKAP51800 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
CLCNKAP51800 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLCNKAP51800 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.23■■□□□ 1.31
CLCNKAP51800 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
CLCNKAP51800 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CLCNKAP51800 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
CLCNKAP51800 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CLCNKAP51800 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.21■■□□□ 1.31
CLCNKAP51800 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.21■■□□□ 1.31
CLCNKAP51800 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.21■■□□□ 1.31
CLCNKAP51800 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CLCNKAP51800 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CLCNKAP51800 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CLCNKAP51800 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.21■■□□□ 1.31
CLCNKAP51800 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.21■■□□□ 1.31
CLCNKAP51800 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CLCNKAP51800 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLCNKAP51800 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLCNKAP51800 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
CLCNKAP51800 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLCNKAP51800 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CLCNKAP51800 AC009299.2-201ENST00000482477 511 ntBASIC23.2■■□□□ 1.3
CLCNKAP51800 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLCNKAP51800 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms