Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CEACAM3P40198 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CEACAM3P40198 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CEACAM3P40198 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.29■□□□□ 0.68
CEACAM3P40198 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CEACAM3P40198 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
CEACAM3P40198 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.29■□□□□ 0.68
CEACAM3P40198 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CEACAM3P40198 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CEACAM3P40198 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CEACAM3P40198 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CEACAM3P40198 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CEACAM3P40198 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.28■□□□□ 0.68
CEACAM3P40198 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CEACAM3P40198 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
CEACAM3P40198 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CEACAM3P40198 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CEACAM3P40198 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.27■□□□□ 0.68
CEACAM3P40198 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CEACAM3P40198 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CEACAM3P40198 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CEACAM3P40198 AL033527.3-201ENST00000566366 1196 ntBASIC19.27■□□□□ 0.68
CEACAM3P40198 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CEACAM3P40198 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CEACAM3P40198 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.27■□□□□ 0.67
CEACAM3P40198 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CEACAM3P40198 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CEACAM3P40198 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CEACAM3P40198 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CEACAM3P40198 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.26■□□□□ 0.67
CEACAM3P40198 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.26■□□□□ 0.67
CEACAM3P40198 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.26■□□□□ 0.67
CEACAM3P40198 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CEACAM3P40198 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CEACAM3P40198 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.26■□□□□ 0.67
CEACAM3P40198 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CEACAM3P40198 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.25■□□□□ 0.67
CEACAM3P40198 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CEACAM3P40198 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CEACAM3P40198 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
CEACAM3P40198 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CEACAM3P40198 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.25■□□□□ 0.67
CEACAM3P40198 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.25■□□□□ 0.67
CEACAM3P40198 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.25■□□□□ 0.67
CEACAM3P40198 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.25■□□□□ 0.67
CEACAM3P40198 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CEACAM3P40198 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CEACAM3P40198 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CEACAM3P40198 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CEACAM3P40198 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.24■□□□□ 0.67
CEACAM3P40198 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CEACAM3P40198 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CEACAM3P40198 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CEACAM3P40198 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.24■□□□□ 0.67
CEACAM3P40198 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CEACAM3P40198 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CEACAM3P40198 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CEACAM3P40198 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CEACAM3P40198 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.23■□□□□ 0.67
CEACAM3P40198 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CEACAM3P40198 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
CEACAM3P40198 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CEACAM3P40198 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.23■□□□□ 0.67
CEACAM3P40198 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.23■□□□□ 0.67
CEACAM3P40198 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.23■□□□□ 0.67
CEACAM3P40198 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.23■□□□□ 0.67
CEACAM3P40198 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CEACAM3P40198 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CEACAM3P40198 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CEACAM3P40198 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CEACAM3P40198 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CEACAM3P40198 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CEACAM3P40198 AC019171.1-201ENST00000601251 1056 ntBASIC19.22■□□□□ 0.67
CEACAM3P40198 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CEACAM3P40198 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CEACAM3P40198 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CEACAM3P40198 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CEACAM3P40198 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CEACAM3P40198 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CEACAM3P40198 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CEACAM3P40198 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.21■□□□□ 0.67
CEACAM3P40198 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.21■□□□□ 0.67
CEACAM3P40198 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.21■□□□□ 0.67
CEACAM3P40198 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.21■□□□□ 0.67
CEACAM3P40198 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CEACAM3P40198 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CEACAM3P40198 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.21■□□□□ 0.67
CEACAM3P40198 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CEACAM3P40198 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CEACAM3P40198 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CEACAM3P40198 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CEACAM3P40198 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CEACAM3P40198 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CEACAM3P40198 LONRF2P2-201ENST00000439212 571 ntBASIC19.2■□□□□ 0.66
CEACAM3P40198 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CEACAM3P40198 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.2■□□□□ 0.66
CEACAM3P40198 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CEACAM3P40198 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CEACAM3P40198 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CEACAM3P40198 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms