Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
HOXC8P31273 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC26.36■■□□□ 1.81
HOXC8P31273 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
HOXC8P31273 LSM7-203ENST00000585409 512 ntTSL 2 BASIC26.36■■□□□ 1.81
HOXC8P31273 AC092028.1-203ENST00000608262 953 ntBASIC26.36■■□□□ 1.81
HOXC8P31273 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.36■■□□□ 1.81
HOXC8P31273 AC019069.1-201ENST00000610008 1333 ntBASIC26.36■■□□□ 1.81
HOXC8P31273 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
HOXC8P31273 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.35■■□□□ 1.81
HOXC8P31273 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.35■■□□□ 1.81
HOXC8P31273 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.35■■□□□ 1.81
HOXC8P31273 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
HOXC8P31273 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
HOXC8P31273 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC26.35■■□□□ 1.81
HOXC8P31273 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
HOXC8P31273 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
HOXC8P31273 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.33■■□□□ 1.81
HOXC8P31273 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
HOXC8P31273 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
HOXC8P31273 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
HOXC8P31273 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
HOXC8P31273 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.33■■□□□ 1.81
HOXC8P31273 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
HOXC8P31273 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
HOXC8P31273 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
HOXC8P31273 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC26.32■■□□□ 1.8
HOXC8P31273 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC26.32■■□□□ 1.8
HOXC8P31273 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.32■■□□□ 1.8
HOXC8P31273 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
HOXC8P31273 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
HOXC8P31273 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.32■■□□□ 1.8
HOXC8P31273 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.32■■□□□ 1.8
HOXC8P31273 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
HOXC8P31273 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC26.31■■□□□ 1.8
HOXC8P31273 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
HOXC8P31273 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
HOXC8P31273 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
HOXC8P31273 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.3■■□□□ 1.8
HOXC8P31273 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
HOXC8P31273 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
HOXC8P31273 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
HOXC8P31273 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
HOXC8P31273 AC008406.3-201ENST00000620001 1374 ntBASIC26.29■■□□□ 1.8
HOXC8P31273 TSPY9P-201ENST00000440215 945 ntBASIC26.28■■□□□ 1.8
HOXC8P31273 TSPY11P-201ENST00000442607 1045 ntBASIC26.28■■□□□ 1.8
HOXC8P31273 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.28■■□□□ 1.8
HOXC8P31273 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.28■■□□□ 1.8
HOXC8P31273 GAK-223ENST00000628912 497 ntTSL 5 BASIC26.28■■□□□ 1.8
HOXC8P31273 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
HOXC8P31273 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
HOXC8P31273 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.27■■□□□ 1.8
HOXC8P31273 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
HOXC8P31273 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
HOXC8P31273 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
HOXC8P31273 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
HOXC8P31273 PEMT-206ENST00000435340 960 ntTSL 5 BASIC26.26■■□□□ 1.79
HOXC8P31273 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
HOXC8P31273 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.26■■□□□ 1.79
HOXC8P31273 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
HOXC8P31273 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
HOXC8P31273 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
HOXC8P31273 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
HOXC8P31273 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
HOXC8P31273 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.24■■□□□ 1.79
HOXC8P31273 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
HOXC8P31273 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.24■■□□□ 1.79
HOXC8P31273 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC26.24■■□□□ 1.79
HOXC8P31273 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
HOXC8P31273 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
HOXC8P31273 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.23■■□□□ 1.79
HOXC8P31273 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
HOXC8P31273 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC26.23■■□□□ 1.79
HOXC8P31273 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.23■■□□□ 1.79
HOXC8P31273 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
HOXC8P31273 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
HOXC8P31273 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
HOXC8P31273 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.22■■□□□ 1.79
HOXC8P31273 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.22■■□□□ 1.79
HOXC8P31273 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
HOXC8P31273 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
HOXC8P31273 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.22■■□□□ 1.79
HOXC8P31273 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC26.22■■□□□ 1.79
HOXC8P31273 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
HOXC8P31273 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
HOXC8P31273 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.21■■□□□ 1.79
HOXC8P31273 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
HOXC8P31273 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.21■■□□□ 1.79
HOXC8P31273 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.21■■□□□ 1.79
HOXC8P31273 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
HOXC8P31273 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
HOXC8P31273 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
HOXC8P31273 AF131216.4-201ENST00000638924 1588 ntBASIC26.2■■□□□ 1.79
HOXC8P31273 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.2■■□□□ 1.78
HOXC8P31273 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.2■■□□□ 1.78
HOXC8P31273 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
HOXC8P31273 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
HOXC8P31273 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
HOXC8P31273 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.19■■□□□ 1.78
HOXC8P31273 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC26.19■■□□□ 1.78
HOXC8P31273 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms