Protein–RNA interactions for Protein: P0DP08

IGHV4-38-2, Immunoglobulin heavy variable 4-38-2, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-38-2P0DP08 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
IGHV4-38-2P0DP08 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
IGHV4-38-2P0DP08 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
IGHV4-38-2P0DP08 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.33■□□□□ 0.68
IGHV4-38-2P0DP08 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
IGHV4-38-2P0DP08 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
IGHV4-38-2P0DP08 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
IGHV4-38-2P0DP08 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IGHV4-38-2P0DP08 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.32■□□□□ 0.68
IGHV4-38-2P0DP08 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IGHV4-38-2P0DP08 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.32■□□□□ 0.68
IGHV4-38-2P0DP08 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
IGHV4-38-2P0DP08 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
IGHV4-38-2P0DP08 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
IGHV4-38-2P0DP08 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IGHV4-38-2P0DP08 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IGHV4-38-2P0DP08 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IGHV4-38-2P0DP08 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.31■□□□□ 0.68
IGHV4-38-2P0DP08 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.31■□□□□ 0.68
IGHV4-38-2P0DP08 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IGHV4-38-2P0DP08 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
IGHV4-38-2P0DP08 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
IGHV4-38-2P0DP08 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.31■□□□□ 0.68
IGHV4-38-2P0DP08 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
IGHV4-38-2P0DP08 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IGHV4-38-2P0DP08 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
IGHV4-38-2P0DP08 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IGHV4-38-2P0DP08 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
IGHV4-38-2P0DP08 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
IGHV4-38-2P0DP08 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IGHV4-38-2P0DP08 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
IGHV4-38-2P0DP08 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IGHV4-38-2P0DP08 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
IGHV4-38-2P0DP08 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IGHV4-38-2P0DP08 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.29■□□□□ 0.68
IGHV4-38-2P0DP08 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.29■□□□□ 0.68
IGHV4-38-2P0DP08 AC137630.3-201ENST00000607245 391 ntBASIC19.29■□□□□ 0.68
IGHV4-38-2P0DP08 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.29■□□□□ 0.68
IGHV4-38-2P0DP08 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.29■□□□□ 0.68
IGHV4-38-2P0DP08 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
IGHV4-38-2P0DP08 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
IGHV4-38-2P0DP08 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
IGHV4-38-2P0DP08 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
IGHV4-38-2P0DP08 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.28■□□□□ 0.68
IGHV4-38-2P0DP08 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.28■□□□□ 0.68
IGHV4-38-2P0DP08 MIR4281-201ENST00000580852 62 ntBASIC19.28■□□□□ 0.68
IGHV4-38-2P0DP08 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IGHV4-38-2P0DP08 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IGHV4-38-2P0DP08 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IGHV4-38-2P0DP08 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IGHV4-38-2P0DP08 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IGHV4-38-2P0DP08 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IGHV4-38-2P0DP08 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
IGHV4-38-2P0DP08 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IGHV4-38-2P0DP08 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.27■□□□□ 0.68
IGHV4-38-2P0DP08 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
IGHV4-38-2P0DP08 ERN1-208ENST00000606895 2068 ntBASIC19.27■□□□□ 0.68
IGHV4-38-2P0DP08 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.27■□□□□ 0.68
IGHV4-38-2P0DP08 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IGHV4-38-2P0DP08 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
IGHV4-38-2P0DP08 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.27■□□□□ 0.67
IGHV4-38-2P0DP08 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
IGHV4-38-2P0DP08 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IGHV4-38-2P0DP08 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IGHV4-38-2P0DP08 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
IGHV4-38-2P0DP08 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
IGHV4-38-2P0DP08 UNC93B8-201ENST00000511903 705 ntBASIC19.26■□□□□ 0.67
IGHV4-38-2P0DP08 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
IGHV4-38-2P0DP08 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IGHV4-38-2P0DP08 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IGHV4-38-2P0DP08 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IGHV4-38-2P0DP08 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IGHV4-38-2P0DP08 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IGHV4-38-2P0DP08 TSPY9P-201ENST00000440215 945 ntBASIC19.25■□□□□ 0.67
IGHV4-38-2P0DP08 TSPY11P-201ENST00000442607 1045 ntBASIC19.25■□□□□ 0.67
IGHV4-38-2P0DP08 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.25■□□□□ 0.67
IGHV4-38-2P0DP08 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.25■□□□□ 0.67
IGHV4-38-2P0DP08 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.25■□□□□ 0.67
IGHV4-38-2P0DP08 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
IGHV4-38-2P0DP08 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
IGHV4-38-2P0DP08 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IGHV4-38-2P0DP08 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
IGHV4-38-2P0DP08 AC021242.3-201ENST00000607598 1377 ntBASIC19.24■□□□□ 0.67
IGHV4-38-2P0DP08 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.24■□□□□ 0.67
IGHV4-38-2P0DP08 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
IGHV4-38-2P0DP08 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.24■□□□□ 0.67
IGHV4-38-2P0DP08 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IGHV4-38-2P0DP08 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.24■□□□□ 0.67
IGHV4-38-2P0DP08 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
IGHV4-38-2P0DP08 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.24■□□□□ 0.67
IGHV4-38-2P0DP08 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IGHV4-38-2P0DP08 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
IGHV4-38-2P0DP08 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IGHV4-38-2P0DP08 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IGHV4-38-2P0DP08 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.23■□□□□ 0.67
IGHV4-38-2P0DP08 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.23■□□□□ 0.67
IGHV4-38-2P0DP08 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.22■□□□□ 0.67
IGHV4-38-2P0DP08 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.22■□□□□ 0.67
IGHV4-38-2P0DP08 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
IGHV4-38-2P0DP08 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms