Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC092666.2-201ENST00000613287 246 ntBASIC24.05■■□□□ 1.44
RETP07949 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RETP07949 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
RETP07949 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
RETP07949 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.04■■□□□ 1.44
RETP07949 LINC01003-201ENST00000564834 1764 ntBASIC24.04■■□□□ 1.44
RETP07949 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC24.04■■□□□ 1.44
RETP07949 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC24.04■■□□□ 1.44
RETP07949 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC24.04■■□□□ 1.44
RETP07949 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC24.04■■□□□ 1.44
RETP07949 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
RETP07949 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RETP07949 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
RETP07949 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.03■■□□□ 1.44
RETP07949 AC133561.4-201ENST00000566112 224 ntBASIC24.03■■□□□ 1.44
RETP07949 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.03■■□□□ 1.44
RETP07949 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RETP07949 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RETP07949 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
RETP07949 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.02■■□□□ 1.44
RETP07949 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
RETP07949 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
RETP07949 AC096631.2-201ENST00000436136 790 ntBASIC24.02■■□□□ 1.44
RETP07949 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.02■■□□□ 1.44
RETP07949 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RETP07949 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RETP07949 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RETP07949 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC24.01■■□□□ 1.43
RETP07949 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
RETP07949 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
RETP07949 AL117332.1-201ENST00000622628 974 ntBASIC24.01■■□□□ 1.43
RETP07949 WHAMMP3-201ENST00000611636 1609 ntBASIC24.01■■□□□ 1.43
RETP07949 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24■■□□□ 1.43
RETP07949 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24■■□□□ 1.43
RETP07949 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
RETP07949 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC24■■□□□ 1.43
RETP07949 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC24■■□□□ 1.43
RETP07949 MIR3621-201ENST00000580529 85 ntBASIC24■■□□□ 1.43
RETP07949 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC24■■□□□ 1.43
RETP07949 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
RETP07949 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RETP07949 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.99■■□□□ 1.43
RETP07949 AC120024.1-201ENST00000562672 995 ntBASIC23.99■■□□□ 1.43
RETP07949 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RETP07949 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RETP07949 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
RETP07949 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.98■■□□□ 1.43
RETP07949 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
RETP07949 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.98■■□□□ 1.43
RETP07949 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.98■■□□□ 1.43
RETP07949 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RETP07949 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RETP07949 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.97■■□□□ 1.43
RETP07949 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
RETP07949 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.97■■□□□ 1.43
RETP07949 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RETP07949 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
RETP07949 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RETP07949 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.96■■□□□ 1.43
RETP07949 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
RETP07949 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RETP07949 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RETP07949 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.96■■□□□ 1.43
RETP07949 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RETP07949 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RETP07949 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.95■■□□□ 1.42
RETP07949 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RETP07949 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RETP07949 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RETP07949 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.95■■□□□ 1.42
RETP07949 RARRES2P6-201ENST00000567333 442 ntBASIC23.95■■□□□ 1.42
RETP07949 AL356740.2-201ENST00000601559 647 ntBASIC23.95■■□□□ 1.42
RETP07949 AC010997.5-201ENST00000609182 354 ntBASIC23.95■■□□□ 1.42
RETP07949 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.95■■□□□ 1.42
RETP07949 MIR6724-1-201ENST00000616420 92 ntBASIC23.95■■□□□ 1.42
RETP07949 MIR6724-2-201ENST00000616483 92 ntBASIC23.95■■□□□ 1.42
RETP07949 MIR6724-4-201ENST00000617390 92 ntBASIC23.95■■□□□ 1.42
RETP07949 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RETP07949 MIR6724-3-201ENST00000622482 92 ntBASIC23.95■■□□□ 1.42
RETP07949 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.95■■□□□ 1.42
RETP07949 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.95■■□□□ 1.42
RETP07949 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RETP07949 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RETP07949 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.94■■□□□ 1.42
RETP07949 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RETP07949 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
RETP07949 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
RETP07949 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RETP07949 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RETP07949 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RETP07949 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
RETP07949 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
RETP07949 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.92■■□□□ 1.42
RETP07949 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RETP07949 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.92■■□□□ 1.42
RETP07949 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.92■■□□□ 1.42
RETP07949 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RETP07949 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
RETP07949 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
RETP07949 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms