Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC24.35■■□□□ 1.49
PDGFBP01127 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
PDGFBP01127 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PDGFBP01127 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PDGFBP01127 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC24.35■■□□□ 1.49
PDGFBP01127 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC24.35■■□□□ 1.49
PDGFBP01127 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PDGFBP01127 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PDGFBP01127 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
PDGFBP01127 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.34■■□□□ 1.49
PDGFBP01127 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PDGFBP01127 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PDGFBP01127 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PDGFBP01127 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC24.34■■□□□ 1.49
PDGFBP01127 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC24.34■■□□□ 1.49
PDGFBP01127 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.34■■□□□ 1.49
PDGFBP01127 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PDGFBP01127 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PDGFBP01127 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC24.33■■□□□ 1.49
PDGFBP01127 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC24.33■■□□□ 1.49
PDGFBP01127 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC24.33■■□□□ 1.49
PDGFBP01127 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PDGFBP01127 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PDGFBP01127 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDGFBP01127 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC24.32■■□□□ 1.48
PDGFBP01127 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
PDGFBP01127 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDGFBP01127 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PDGFBP01127 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PDGFBP01127 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PDGFBP01127 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
PDGFBP01127 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC24.31■■□□□ 1.48
PDGFBP01127 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.31■■□□□ 1.48
PDGFBP01127 AC024257.2-201ENST00000549699 147 ntBASIC24.31■■□□□ 1.48
PDGFBP01127 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC24.31■■□□□ 1.48
PDGFBP01127 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.31■■□□□ 1.48
PDGFBP01127 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PDGFBP01127 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PDGFBP01127 MIR6821-201ENST00000617625 74 ntBASIC24.3■■□□□ 1.48
PDGFBP01127 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
PDGFBP01127 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PDGFBP01127 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
PDGFBP01127 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
PDGFBP01127 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PDGFBP01127 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24.29■■□□□ 1.48
PDGFBP01127 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
PDGFBP01127 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
PDGFBP01127 AL162430.1-201ENST00000480705 870 ntBASIC24.29■■□□□ 1.48
PDGFBP01127 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PDGFBP01127 AL355001.2-201ENST00000620617 1191 ntBASIC24.29■■□□□ 1.48
PDGFBP01127 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PDGFBP01127 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC24.28■■□□□ 1.48
PDGFBP01127 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
PDGFBP01127 EDA-201ENST00000338901 1233 ntBASIC24.28■■□□□ 1.48
PDGFBP01127 GLI3-203ENST00000437480 451 ntTSL 2 BASIC24.28■■□□□ 1.48
PDGFBP01127 AC087623.3-201ENST00000607047 1098 ntBASIC24.28■■□□□ 1.48
PDGFBP01127 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PDGFBP01127 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
PDGFBP01127 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
PDGFBP01127 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC24.27■■□□□ 1.48
PDGFBP01127 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
PDGFBP01127 STOX2-205ENST00000513034 807 ntTSL 3 BASIC24.27■■□□□ 1.48
PDGFBP01127 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PDGFBP01127 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PDGFBP01127 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC24.26■■□□□ 1.47
PDGFBP01127 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.26■■□□□ 1.47
PDGFBP01127 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC24.26■■□□□ 1.47
PDGFBP01127 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PDGFBP01127 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PDGFBP01127 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
PDGFBP01127 AF213884.3-201ENST00000563833 479 ntBASIC24.25■■□□□ 1.47
PDGFBP01127 AL136967.2-201ENST00000623968 743 ntBASIC24.25■■□□□ 1.47
PDGFBP01127 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC24.25■■□□□ 1.47
PDGFBP01127 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PDGFBP01127 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC24.25■■□□□ 1.47
PDGFBP01127 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PDGFBP01127 AL449106.1-201ENST00000608517 1980 ntBASIC24.24■■□□□ 1.47
PDGFBP01127 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PDGFBP01127 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PDGFBP01127 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PDGFBP01127 AC097381.1-201ENST00000429019 1296 ntBASIC24.24■■□□□ 1.47
PDGFBP01127 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC24.24■■□□□ 1.47
PDGFBP01127 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC24.24■■□□□ 1.47
PDGFBP01127 AC011551.1-201ENST00000614101 683 ntBASIC24.24■■□□□ 1.47
PDGFBP01127 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
PDGFBP01127 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
PDGFBP01127 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PDGFBP01127 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
PDGFBP01127 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PDGFBP01127 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
PDGFBP01127 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PDGFBP01127 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
PDGFBP01127 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PDGFBP01127 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PDGFBP01127 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PDGFBP01127 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC24.22■■□□□ 1.47
PDGFBP01127 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.22■■□□□ 1.47
PDGFBP01127 AF131216.4-201ENST00000638924 1588 ntBASIC24.21■■□□□ 1.47
PDGFBP01127 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
PDGFBP01127 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms