Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC28.05■■■□□ 2.08
CTNND1O60716 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CTNND1O60716 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC28.05■■■□□ 2.08
CTNND1O60716 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC28.05■■■□□ 2.08
CTNND1O60716 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
CTNND1O60716 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC28.04■■■□□ 2.08
CTNND1O60716 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CTNND1O60716 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CTNND1O60716 SNAI3-AS1-204ENST00000567997 2048 ntBASIC28.03■■■□□ 2.08
CTNND1O60716 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC28.03■■■□□ 2.08
CTNND1O60716 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC28.03■■■□□ 2.08
CTNND1O60716 AC142086.6-201ENST00000621154 1765 ntBASIC28.02■■■□□ 2.08
CTNND1O60716 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC28.02■■■□□ 2.08
CTNND1O60716 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC28.02■■■□□ 2.08
CTNND1O60716 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC28.02■■■□□ 2.08
CTNND1O60716 AC011551.1-201ENST00000614101 683 ntBASIC28.02■■■□□ 2.08
CTNND1O60716 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC28.02■■■□□ 2.08
CTNND1O60716 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CTNND1O60716 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC28■■■□□ 2.07
CTNND1O60716 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC28■■■□□ 2.07
CTNND1O60716 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC28■■■□□ 2.07
CTNND1O60716 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CTNND1O60716 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC28■■■□□ 2.07
CTNND1O60716 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CTNND1O60716 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CTNND1O60716 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC27.97■■■□□ 2.07
CTNND1O60716 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
CTNND1O60716 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC27.97■■■□□ 2.07
CTNND1O60716 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC27.97■■■□□ 2.07
CTNND1O60716 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC27.97■■■□□ 2.07
CTNND1O60716 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
CTNND1O60716 GAK-223ENST00000628912 497 ntTSL 5 BASIC27.97■■■□□ 2.07
CTNND1O60716 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC27.97■■■□□ 2.07
CTNND1O60716 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC27.96■■■□□ 2.07
CTNND1O60716 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
CTNND1O60716 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC27.95■■■□□ 2.06
CTNND1O60716 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
CTNND1O60716 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC27.95■■■□□ 2.06
CTNND1O60716 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC27.94■■■□□ 2.06
CTNND1O60716 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC27.94■■■□□ 2.06
CTNND1O60716 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
CTNND1O60716 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC27.94■■■□□ 2.06
CTNND1O60716 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC27.93■■■□□ 2.06
CTNND1O60716 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
CTNND1O60716 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
CTNND1O60716 AC010997.5-201ENST00000609182 354 ntBASIC27.93■■■□□ 2.06
CTNND1O60716 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
CTNND1O60716 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
CTNND1O60716 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
CTNND1O60716 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC27.92■■■□□ 2.06
CTNND1O60716 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC27.92■■■□□ 2.06
CTNND1O60716 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC27.92■■■□□ 2.06
CTNND1O60716 RPP21-222ENST00000433076 577 ntTSL 2 BASIC27.92■■■□□ 2.06
CTNND1O60716 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC27.92■■■□□ 2.06
CTNND1O60716 TRIR-202ENST00000588213 841 ntTSL 3 BASIC27.92■■■□□ 2.06
CTNND1O60716 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC27.91■■■□□ 2.06
CTNND1O60716 SHF-206ENST00000560471 2499 ntTSL 5 BASIC27.91■■■□□ 2.06
CTNND1O60716 SENP5-202ENST00000419026 973 ntTSL 3 BASIC27.91■■■□□ 2.06
CTNND1O60716 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
CTNND1O60716 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC27.91■■■□□ 2.06
CTNND1O60716 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC27.91■■■□□ 2.06
CTNND1O60716 AC131281.2-201ENST00000520478 145 ntBASIC27.91■■■□□ 2.06
CTNND1O60716 SRR-208ENST00000576848 588 ntTSL 4 BASIC27.91■■■□□ 2.06
CTNND1O60716 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC27.91■■■□□ 2.06
CTNND1O60716 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC27.9■■■□□ 2.06
CTNND1O60716 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC27.9■■■□□ 2.06
CTNND1O60716 SSSCA1-AS1-201ENST00000567594 614 ntBASIC27.9■■■□□ 2.06
CTNND1O60716 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC27.9■■■□□ 2.06
CTNND1O60716 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC27.9■■■□□ 2.06
CTNND1O60716 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
CTNND1O60716 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
CTNND1O60716 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC27.89■■■□□ 2.06
CTNND1O60716 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC27.89■■■□□ 2.06
CTNND1O60716 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC27.89■■■□□ 2.06
CTNND1O60716 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC27.89■■■□□ 2.05
CTNND1O60716 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC27.88■■■□□ 2.05
CTNND1O60716 TK2-202ENST00000417693 1046 ntTSL 2 BASIC27.88■■■□□ 2.05
CTNND1O60716 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC27.88■■■□□ 2.05
CTNND1O60716 MIR6724-1-201ENST00000616420 92 ntBASIC27.88■■■□□ 2.05
CTNND1O60716 MIR6724-2-201ENST00000616483 92 ntBASIC27.88■■■□□ 2.05
CTNND1O60716 MIR6724-4-201ENST00000617390 92 ntBASIC27.88■■■□□ 2.05
CTNND1O60716 MIR6724-3-201ENST00000622482 92 ntBASIC27.88■■■□□ 2.05
CTNND1O60716 AL117332.1-201ENST00000622628 974 ntBASIC27.88■■■□□ 2.05
CTNND1O60716 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC27.88■■■□□ 2.05
CTNND1O60716 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC27.87■■■□□ 2.05
CTNND1O60716 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
CTNND1O60716 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
CTNND1O60716 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
CTNND1O60716 MIR3621-201ENST00000580529 85 ntBASIC27.87■■■□□ 2.05
CTNND1O60716 MTDHP2-201ENST00000601468 714 ntBASIC27.87■■■□□ 2.05
CTNND1O60716 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
CTNND1O60716 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC27.87■■■□□ 2.05
CTNND1O60716 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC27.86■■■□□ 2.05
CTNND1O60716 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC27.86■■■□□ 2.05
CTNND1O60716 MIR638-201ENST00000385237 100 ntBASIC27.86■■■□□ 2.05
CTNND1O60716 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
CTNND1O60716 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
CTNND1O60716 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC27.86■■■□□ 2.05
CTNND1O60716 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC27.86■■■□□ 2.05
CTNND1O60716 LSM4-201ENST00000252816 986 ntTSL 2 BASIC27.85■■■□□ 2.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms