Protein–RNA interactions for Protein: O00425

IGF2BP3, Insulin-like growth factor 2 mRNA-binding protein 3, humanhuman

Known RBP eCLIP

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGF2BP3O00425 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.289e-6■■■□□ 18
IGF2BP3O00425 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.539e-6■■■□□ 18
IGF2BP3O00425 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.929e-6■■■□□ 18
IGF2BP3O00425 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC28.95■■■□□ 2.238e-7■■■□□ 17.9
IGF2BP3O00425 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC24.47■■□□□ 1.518e-7■■■□□ 17.9
IGF2BP3O00425 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.458e-7■■■□□ 17.9
IGF2BP3O00425 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC22.71■■□□□ 1.238e-7■■■□□ 17.9
IGF2BP3O00425 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.77■□□□□ 0.928e-7■■■□□ 17.9
IGF2BP3O00425 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.56■□□□□ 0.888e-7■■■□□ 17.9
IGF2BP3O00425 PYCR1-213ENST00000584848 949 ntTSL 518.45■□□□□ 0.548e-7■■■□□ 17.9
IGF2BP3O00425 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.488e-7■■■□□ 17.9
IGF2BP3O00425 EMP2-202ENST00000359543 5197 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.582e-9■■■□□ 17.9
IGF2BP3O00425 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.515e-8■■■□□ 17.9
IGF2BP3O00425 ADIPOR1-205ENST00000495562 2109 ntTSL 210.15□□□□□ -0.785e-8■■■□□ 17.9
IGF2BP3O00425 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC10.12□□□□□ -0.796e-7■■■□□ 17.9
IGF2BP3O00425 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.011e-6■■■□□ 17.8
IGF2BP3O00425 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.181e-6■■■□□ 17.8
IGF2BP3O00425 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.856e-6■■■□□ 17.8
IGF2BP3O00425 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.896e-6■■■□□ 17.8
IGF2BP3O00425 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.24□□□□□ -1.896e-6■■■□□ 17.8
IGF2BP3O00425 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.072e-9■■■□□ 17.8
IGF2BP3O00425 DHCR24-203ENST00000535035 4153 ntTSL 1 (best) BASIC11.44□□□□□ -0.582e-9■■■□□ 17.8
IGF2BP3O00425 MTHFD2-202ENST00000409601 1865 ntTSL 5 BASIC14.23□□□□□ -0.132e-8■■■□□ 17.8
IGF2BP3O00425 MTHFD2-201ENST00000394053 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.672e-8■■■□□ 17.8
IGF2BP3O00425 MTHFD2-205ENST00000470592 1396 ntTSL 210.55□□□□□ -0.722e-8■■■□□ 17.8
IGF2BP3O00425 MTHFD2-203ENST00000409804 1757 ntTSL 5 BASIC10.43□□□□□ -0.742e-8■■■□□ 17.8
IGF2BP3O00425 MTHFD2-208ENST00000489041 1135 ntTSL 210.38□□□□□ -0.752e-8■■■□□ 17.8
IGF2BP3O00425 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.131e-6■■■□□ 17.8
IGF2BP3O00425 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.061e-6■■■□□ 17.8
IGF2BP3O00425 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.741e-6■■■□□ 17.8
IGF2BP3O00425 AC099811.2-202ENST00000592248 694 ntTSL 311.73□□□□□ -0.531e-6■■■□□ 17.8
IGF2BP3O00425 AC099811.2-201ENST00000585562 646 ntTSL 311.18□□□□□ -0.621e-6■■■□□ 17.8
IGF2BP3O00425 RPL30-203ENST00000517489 631 ntTSL 218.3■□□□□ 0.524e-8■■■□□ 17.7
IGF2BP3O00425 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.383e-7■■■□□ 17.7
IGF2BP3O00425 POLR2A-209ENST00000617998 6751 ntTSL 1 (best)11.43□□□□□ -0.588e-6■■■□□ 17.7
IGF2BP3O00425 APP-205ENST00000358918 2366 ntTSL 5 BASIC15.6■□□□□ 0.091e-6■■■□□ 17.7
IGF2BP3O00425 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.488e-6■■■□□ 17.7
IGF2BP3O00425 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.918e-6■■■□□ 17.7
IGF2BP3O00425 CXCL16-205ENST00000576153 1484 ntTSL 211.3□□□□□ -0.68e-6■■■□□ 17.7
IGF2BP3O00425 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.38□□□□□ -1.551e-6■■■□□ 17.7
IGF2BP3O00425 PRRC2C-204ENST00000426496 10175 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.562e-6■■■□□ 17.6
IGF2BP3O00425 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC8.48□□□□□ -1.052e-6■■■□□ 17.6
IGF2BP3O00425 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.292e-6■■■□□ 17.6
IGF2BP3O00425 PRRC2C-211ENST00000495585 5566 ntTSL 1 (best)5.28□□□□□ -1.562e-6■■■□□ 17.6
IGF2BP3O00425 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC31.35■■■□□ 2.618e-6■■■□□ 17.6
IGF2BP3O00425 POLR1D-210ENST00000627604 565 ntTSL 426.34■■□□□ 1.818e-6■■■□□ 17.6
IGF2BP3O00425 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC22.84■■□□□ 1.258e-6■■■□□ 17.6
IGF2BP3O00425 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC19.13■□□□□ 0.658e-6■■■□□ 17.6
IGF2BP3O00425 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.08■□□□□ 0.648e-6■■■□□ 17.6
IGF2BP3O00425 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.43■□□□□ 0.548e-6■■■□□ 17.6
IGF2BP3O00425 POLR1D-204ENST00000465887 2118 ntTSL 218.03■□□□□ 0.488e-6■■■□□ 17.6
IGF2BP3O00425 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.7■□□□□ 0.268e-6■■■□□ 17.6
IGF2BP3O00425 POLR1D-206ENST00000489647 1723 ntTSL 1 (best) BASIC12.08□□□□□ -0.488e-6■■■□□ 17.6
IGF2BP3O00425 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC7.53□□□□□ -1.28e-6■■■□□ 17.6
IGF2BP3O00425 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.93□□□□□ -1.38e-6■■■□□ 17.6
IGF2BP3O00425 POLR1D-222ENST00000637389 129 ntTSL 52.05□□□□□ -2.088e-6■■■□□ 17.6
IGF2BP3O00425 IGF1R-201ENST00000268035 11803 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.575e-7■■■□□ 17.6
IGF2BP3O00425 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC8.77□□□□□ -1.015e-7■■■□□ 17.6
IGF2BP3O00425 FAT1-208ENST00000509647 1852 ntTSL 1 (best)18.54■□□□□ 0.562e-6■■■□□ 17.6
IGF2BP3O00425 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.78■■□□□ 1.081e-6■■■□□ 17.6
IGF2BP3O00425 SSR1-205ENST00000475213 446 ntTSL 315.08■□□□□ 01e-6■■■□□ 17.6
IGF2BP3O00425 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.181e-6■■■□□ 17.6
IGF2BP3O00425 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.236e-8■■■□□ 17.6
IGF2BP3O00425 ATP1A1-211ENST00000537345 3763 ntAPPRIS ALT1 TSL 2 BASIC12.13□□□□□ -0.476e-8■■■□□ 17.6
IGF2BP3O00425 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.6□□□□□ -1.196e-8■■■□□ 17.6
IGF2BP3O00425 RPS4X-203ENST00000470671 610 ntTSL 33.62□□□□□ -1.835e-7■■■□□ 17.5
IGF2BP3O00425 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.054e-7■■■□□ 17.5
IGF2BP3O00425 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.133e-6■■■□□ 17.5
IGF2BP3O00425 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.273e-6■■■□□ 17.5
IGF2BP3O00425 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.699e-6■■■□□ 17.5
IGF2BP3O00425 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC25.83■■□□□ 1.739e-6■■■□□ 17.5
IGF2BP3O00425 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.699e-6■■■□□ 17.5
IGF2BP3O00425 UQCR11-204ENST00000593029 533 ntTSL 224.28■■□□□ 1.489e-6■■■□□ 17.5
IGF2BP3O00425 UQCR11-205ENST00000593264 409 ntTSL 324.28■■□□□ 1.489e-6■■■□□ 17.5
IGF2BP3O00425 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.489e-6■■■□□ 17.5
IGF2BP3O00425 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.419e-6■■■□□ 17.5
IGF2BP3O00425 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.229e-6■■■□□ 17.5
IGF2BP3O00425 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC22.01■■□□□ 1.119e-6■■■□□ 17.5
IGF2BP3O00425 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.919e-6■■■□□ 17.5
IGF2BP3O00425 CALM1-206ENST00000553630 1420 ntTSL 520.46■□□□□ 0.873e-6■■■□□ 17.5
IGF2BP3O00425 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.819e-6■■■□□ 17.5
IGF2BP3O00425 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC18.98■□□□□ 0.633e-6■■■□□ 17.5
IGF2BP3O00425 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.459e-6■■■□□ 17.5
IGF2BP3O00425 NMT1-205ENST00000587120 573 ntTSL 517.8■□□□□ 0.449e-6■■■□□ 17.5
IGF2BP3O00425 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC17.26■□□□□ 0.359e-6■■■□□ 17.5
IGF2BP3O00425 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC16.39■□□□□ 0.219e-6■■■□□ 17.5
IGF2BP3O00425 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.169e-6■■■□□ 17.5
IGF2BP3O00425 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.169e-6■■■□□ 17.5
IGF2BP3O00425 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.039e-6■■■□□ 17.5
IGF2BP3O00425 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.039e-6■■■□□ 17.5
IGF2BP3O00425 ANXA5-203ENST00000506395 1606 ntTSL 513.86□□□□□ -0.199e-6■■■□□ 17.5
IGF2BP3O00425 USP14-202ENST00000383589 2168 ntTSL 5 BASIC13.34□□□□□ -0.279e-6■■■□□ 17.5
IGF2BP3O00425 CALM1-201ENST00000356978 4242 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.313e-6■■■□□ 17.5
IGF2BP3O00425 SERP1-203ENST00000479209 3934 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.329e-6■■■□□ 17.5
IGF2BP3O00425 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.339e-6■■■□□ 17.5
IGF2BP3O00425 NMT1-213ENST00000592782 4999 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.379e-6■■■□□ 17.5
IGF2BP3O00425 PTPN23-206ENST00000602307 5119 ntTSL 212.56□□□□□ -0.49e-6■■■□□ 17.5
IGF2BP3O00425 DPY19L3-201ENST00000342179 6015 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.429e-6■■■□□ 17.5
IGF2BP3O00425 USP14-205ENST00000578942 3189 ntTSL 211.23□□□□□ -0.619e-6■■■□□ 17.5
IGF2BP3O00425 PTPN12-203ENST00000415482 2316 ntTSL 5 BASIC11.15□□□□□ -0.629e-6■■■□□ 17.5
Retrieved 100 of 3,649 protein–RNA pairs in 30.3 ms