RNA–Protein interactions for RNA: ENST00000576153.5

CXCL16-205, Transcript of C-X-C motif chemokine ligand 16, humanhuman

TSL 2

Gene CXCL16, Length 1,484 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-205ENST00000576153 PELP1Q8IZL8 1130 aaKnown RBP18.86■□□□□ 0.61
CXCL16-205ENST00000576153 MYT1Q01538 1121 aa18.6■□□□□ 0.57
CXCL16-205ENST00000576153 NISCHQ9Y2I1 1504 aa18.42■□□□□ 0.54
CXCL16-205ENST00000576153 TTBK1Q5TCY1 1321 aaPredicted RBP17.93■□□□□ 0.46
CXCL16-205ENST00000576153 ABCC9O60706 1549 aa17.92■□□□□ 0.46
CXCL16-205ENST00000576153 DNAJC5BQ9UF47 199 aa17.74■□□□□ 0.43
CXCL16-205ENST00000576153 HRCP23327 699 aa17.62■□□□□ 0.41
CXCL16-205ENST00000576153 AEBP2Q6ZN18 517 aaPredicted RBP17.48■□□□□ 0.39
CXCL16-205ENST00000576153 SCAF1Q9H7N4 1312 aaKnown RBP17.06■□□□□ 0.32
CXCL16-205ENST00000576153 DNAJC5Q9H3Z4 198 aa17■□□□□ 0.31
CXCL16-205ENST00000576153 CCDC180Q9P1Z9 1646 aa16.97■□□□□ 0.31
CXCL16-205ENST00000576153 PRKCSHP14314 528 aaPredicted RBP16.94■□□□□ 0.3
CXCL16-205ENST00000576153 ERICH6Q7L0X2 663 aa16.83■□□□□ 0.28
CXCL16-205ENST00000576153 APLP2Q06481 763 aa16.8■□□□□ 0.28
CXCL16-205ENST00000576153 BCL11AQ9H165 835 aa16.73■□□□□ 0.27
CXCL16-205ENST00000576153 PPARGC1BQ86YN6 1023 aaKnown RBP16.72■□□□□ 0.27
CXCL16-205ENST00000576153 RB1CC1Q8TDY2 1594 aa16.62■□□□□ 0.25
CXCL16-205ENST00000576153 PABPN1Q86U42 306 aaKnown RBP eCLIP16.53■□□□□ 0.24
CXCL16-205ENST00000576153 FAM9AQ8IZU1 332 aaPredicted RBP16.49■□□□□ 0.23
CXCL16-205ENST00000576153 CENPBP07199 599 aaPredicted RBP16.48■□□□□ 0.23
CXCL16-205ENST00000576153 ACIN1Q9UKV3 1341 aaKnown RBP16.46■□□□□ 0.23
CXCL16-205ENST00000576153 CHIC1Q5VXU3 224 aa16.41■□□□□ 0.22
CXCL16-205ENST00000576153 ZEB1P37275 1124 aaPredicted RBP16.38■□□□□ 0.21
CXCL16-205ENST00000576153 PCGF6Q9BYE7 350 aa16.34■□□□□ 0.21
CXCL16-205ENST00000576153 UNC13AQ9UPW8 1703 aa16.3■□□□□ 0.2
CXCL16-205ENST00000576153 DCAF1Q9Y4B6 1507 aa16.3■□□□□ 0.2
CXCL16-205ENST00000576153 MYO15BQ96JP2 1530 aa16.28■□□□□ 0.2
CXCL16-205ENST00000576153 SLC24A1O60721 1099 aa16.28■□□□□ 0.2
CXCL16-205ENST00000576153 NACADO15069 1562 aa16.27■□□□□ 0.2
CXCL16-205ENST00000576153 CECR2Q9BXF3 1484 aa16.26■□□□□ 0.19
CXCL16-205ENST00000576153 BICRAQ9NZM4 1560 aa16.21■□□□□ 0.19
CXCL16-205ENST00000576153 NEUROD1Q13562 356 aa16.17■□□□□ 0.18
CXCL16-205ENST00000576153 GTF3C3Q9Y5Q9 886 aa16.16■□□□□ 0.18
CXCL16-205ENST00000576153 CC2D2AQ9P2K1 1620 aa16.16■□□□□ 0.18
CXCL16-205ENST00000576153 ANP32EQ9BTT0 268 aa16.15■□□□□ 0.18
CXCL16-205ENST00000576153 DCAF8L2P0C7V8 631 aa15.93■□□□□ 0.14
CXCL16-205ENST00000576153 TRIM26Q12899 539 aaPredicted RBP15.91■□□□□ 0.14
CXCL16-205ENST00000576153 DAXXQ9UER7 740 aaPredicted RBP15.89■□□□□ 0.13
CXCL16-205ENST00000576153 EIF4G1Q04637 1599 aaKnown RBP15.88■□□□□ 0.13
CXCL16-205ENST00000576153 CUX2O14529 1486 aa15.86■□□□□ 0.13
CXCL16-205ENST00000576153 SHROOM4Q9ULL8 1493 aa15.86■□□□□ 0.13
CXCL16-205ENST00000576153 TRIM41Q8WV44 630 aa15.81■□□□□ 0.12
CXCL16-205ENST00000576153 CSRNP3Q8WYN3 585 aa15.81■□□□□ 0.12
CXCL16-205ENST00000576153 CLSPNQ9HAW4 1339 aa15.74■□□□□ 0.11
CXCL16-205ENST00000576153 UBE2Q2Q8WVN8 375 aa15.66■□□□□ 0.1
CXCL16-205ENST00000576153 EIF5BO60841 1220 aaKnown RBP15.59■□□□□ 0.09
CXCL16-205ENST00000576153 ERCC6Q03468 1493 aa15.53■□□□□ 0.08
CXCL16-205ENST00000576153 TSHZ2Q9NRE2 1034 aa15.52■□□□□ 0.07
CXCL16-205ENST00000576153 MYT1LQ9UL68 1186 aa15.49■□□□□ 0.07
CXCL16-205ENST00000576153 DIEXFQ68CQ4 756 aaKnown RBP15.48■□□□□ 0.07
CXCL16-205ENST00000576153 ERICH6BQ5W0A0 696 aa15.45■□□□□ 0.06
CXCL16-205ENST00000576153 SCRIBQ14160 1630 aa15.4■□□□□ 0.06
CXCL16-205ENST00000576153 ANO8Q9HCE9 1232 aaPredicted RBP15.4■□□□□ 0.06
CXCL16-205ENST00000576153 SUPT16HQ9Y5B9 1047 aaKnown RBP15.27■□□□□ 0.04
CXCL16-205ENST00000576153 THOC2Q8NI27 1593 aaKnown RBP15.18■□□□□ 0.02
CXCL16-205ENST00000576153 PKNOX2Q96KN3 472 aa15.15■□□□□ 0.02
CXCL16-205ENST00000576153 NESP48681 1621 aa15.13■□□□□ 0.01
CXCL16-205ENST00000576153 SALL2Q9Y467 1007 aaPredicted RBP15.12■□□□□ 0.01
CXCL16-205ENST00000576153 ZNF316A6NFI3 1004 aaPredicted RBP15.07■□□□□ 0
CXCL16-205ENST00000576153 SENP3Q9H4L4 574 aaPredicted RBP15.05■□□□□ -0
CXCL16-205ENST00000576153 ZCCHC6Q5VYS8 1495 aaKnown RBP15.05■□□□□ -0
CXCL16-205ENST00000576153 NCAPD3P42695 1498 aa15.04■□□□□ -0
CXCL16-205ENST00000576153 PODXL2Q9NZ53 605 aa15.04■□□□□ -0
CXCL16-205ENST00000576153 SUPT5HO00267 1087 aaKnown RBP15.03■□□□□ -0
CXCL16-205ENST00000576153 PLEKHG5O94827 1062 aa15.03■□□□□ -0
CXCL16-205ENST00000576153 FANCIQ9NVI1 1328 aa15.03■□□□□ -0
CXCL16-205ENST00000576153 DEKP35659 375 aaKnown RBP15.02■□□□□ -0
CXCL16-205ENST00000576153 RBM19Q9Y4C8 960 aaKnown RBP15.01□□□□□ -0.01
CXCL16-205ENST00000576153 SMARCA2P51531 1590 aa14.97□□□□□ -0.01
CXCL16-205ENST00000576153 BAZ1AQ9NRL2 1556 aaPredicted RBP14.97□□□□□ -0.01
CXCL16-205ENST00000576153 MSH5O43196 834 aa14.97□□□□□ -0.01
CXCL16-205ENST00000576153 LOC105371045A0A1W2PR82 267 aa14.96□□□□□ -0.01
CXCL16-205ENST00000576153 OSCARQ8IYS5 282 aa14.96□□□□□ -0.01
CXCL16-205ENST00000576153 YTHDC1Q96MU7 727 aaKnown RBP14.96□□□□□ -0.01
CXCL16-205ENST00000576153 MIER1Q8N108 512 aa14.92□□□□□ -0.02
CXCL16-205ENST00000576153 KIF21AQ7Z4S6 1674 aa14.91□□□□□ -0.02
CXCL16-205ENST00000576153 RIMBP3CA6NJZ7 1639 aa14.91□□□□□ -0.02
CXCL16-205ENST00000576153 RIMBP3BA6NNM3 1639 aa14.91□□□□□ -0.02
CXCL16-205ENST00000576153 RIMBP3Q9UFD9 1639 aa14.91□□□□□ -0.02
CXCL16-205ENST00000576153 CCER1Q8TC90 406 aaPredicted RBP14.88□□□□□ -0.03
CXCL16-205ENST00000576153 CCDC136Q96JN2 1154 aa14.86□□□□□ -0.03
CXCL16-205ENST00000576153 LAMC3Q9Y6N6 1575 aa14.86□□□□□ -0.03
CXCL16-205ENST00000576153 ATAD2BQ9ULI0 1458 aa14.85□□□□□ -0.03
CXCL16-205ENST00000576153 HMGXB3Q12766 1538 aa14.83□□□□□ -0.04
CXCL16-205ENST00000576153 TRHP20396 242 aaPredicted RBP14.82□□□□□ -0.04
CXCL16-205ENST00000576153 NEFLP07196 543 aa14.79□□□□□ -0.04
CXCL16-205ENST00000576153 PDS5BQ9NTI5 1447 aa14.79□□□□□ -0.04
CXCL16-205ENST00000576153 PHF23Q9BUL5 403 aaPredicted RBP14.78□□□□□ -0.04
CXCL16-205ENST00000576153 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.76□□□□□ -0.05
CXCL16-205ENST00000576153 ARHGEF11O15085 1522 aa14.75□□□□□ -0.05
CXCL16-205ENST00000576153 WDR62O43379 1518 aa14.74□□□□□ -0.05
CXCL16-205ENST00000576153 MRC2Q9UBG0 1479 aa14.73□□□□□ -0.05
CXCL16-205ENST00000576153 ILDR1Q86SU0 546 aaPredicted RBP14.71□□□□□ -0.05
CXCL16-205ENST00000576153 C11orf95C9JLR9 678 aaPredicted RBP14.68□□□□□ -0.06
CXCL16-205ENST00000576153 GLIPR1L2Q4G1C9 344 aa14.68□□□□□ -0.06
CXCL16-205ENST00000576153 CYB5RLQ6IPT4 315 aa14.68□□□□□ -0.06
CXCL16-205ENST00000576153 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.65□□□□□ -0.06
CXCL16-205ENST00000576153 BAZ1BQ9UIG0 1483 aaKnown RBP14.63□□□□□ -0.07
CXCL16-205ENST00000576153 IL27Q8NEV9 243 aa14.6□□□□□ -0.07
CXCL16-205ENST00000576153 SMARCA4P51532 1647 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms