Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CHKB-CPT1BH3BT56 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC13.4□□□□□ -0.26
CHKB-CPT1BH3BT56 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CHKB-CPT1BH3BT56 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHKB-CPT1BH3BT56 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHKB-CPT1BH3BT56 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
CHKB-CPT1BH3BT56 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
CHKB-CPT1BH3BT56 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHKB-CPT1BH3BT56 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CHKB-CPT1BH3BT56 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CHKB-CPT1BH3BT56 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHKB-CPT1BH3BT56 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHKB-CPT1BH3BT56 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC13.39□□□□□ -0.27
CHKB-CPT1BH3BT56 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHKB-CPT1BH3BT56 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHKB-CPT1BH3BT56 HR-201ENST00000312841 5351 ntTSL 5 BASIC13.39□□□□□ -0.27
CHKB-CPT1BH3BT56 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHKB-CPT1BH3BT56 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHKB-CPT1BH3BT56 RNF165-205ENST00000588679 2904 ntBASIC13.39□□□□□ -0.27
CHKB-CPT1BH3BT56 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHKB-CPT1BH3BT56 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
CHKB-CPT1BH3BT56 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHKB-CPT1BH3BT56 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHKB-CPT1BH3BT56 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHKB-CPT1BH3BT56 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CHKB-CPT1BH3BT56 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CHKB-CPT1BH3BT56 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHKB-CPT1BH3BT56 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHKB-CPT1BH3BT56 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHKB-CPT1BH3BT56 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHKB-CPT1BH3BT56 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHKB-CPT1BH3BT56 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHKB-CPT1BH3BT56 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHKB-CPT1BH3BT56 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHKB-CPT1BH3BT56 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHKB-CPT1BH3BT56 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CHKB-CPT1BH3BT56 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHKB-CPT1BH3BT56 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
CHKB-CPT1BH3BT56 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CHKB-CPT1BH3BT56 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CHKB-CPT1BH3BT56 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
CHKB-CPT1BH3BT56 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHKB-CPT1BH3BT56 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC13.37□□□□□ -0.27
CHKB-CPT1BH3BT56 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CHKB-CPT1BH3BT56 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHKB-CPT1BH3BT56 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
CHKB-CPT1BH3BT56 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHKB-CPT1BH3BT56 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHKB-CPT1BH3BT56 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHKB-CPT1BH3BT56 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CHKB-CPT1BH3BT56 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHKB-CPT1BH3BT56 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHKB-CPT1BH3BT56 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CHKB-CPT1BH3BT56 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHKB-CPT1BH3BT56 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHKB-CPT1BH3BT56 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHKB-CPT1BH3BT56 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
CHKB-CPT1BH3BT56 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CHKB-CPT1BH3BT56 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHKB-CPT1BH3BT56 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC13.35□□□□□ -0.27
CHKB-CPT1BH3BT56 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHKB-CPT1BH3BT56 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHKB-CPT1BH3BT56 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHKB-CPT1BH3BT56 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CHKB-CPT1BH3BT56 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHKB-CPT1BH3BT56 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CHKB-CPT1BH3BT56 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHKB-CPT1BH3BT56 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CHKB-CPT1BH3BT56 SLC25A24-204ENST00000569674 2357 ntBASIC13.35□□□□□ -0.27
CHKB-CPT1BH3BT56 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CHKB-CPT1BH3BT56 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CHKB-CPT1BH3BT56 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CHKB-CPT1BH3BT56 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC13.34□□□□□ -0.27
CHKB-CPT1BH3BT56 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHKB-CPT1BH3BT56 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC13.34□□□□□ -0.27
CHKB-CPT1BH3BT56 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHKB-CPT1BH3BT56 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHKB-CPT1BH3BT56 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHKB-CPT1BH3BT56 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC13.33□□□□□ -0.27
CHKB-CPT1BH3BT56 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CHKB-CPT1BH3BT56 MED17-221ENST00000639724 2317 ntTSL 5 BASIC13.33□□□□□ -0.28
CHKB-CPT1BH3BT56 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHKB-CPT1BH3BT56 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC13.33□□□□□ -0.28
CHKB-CPT1BH3BT56 AL121603.2-201ENST00000557373 2117 ntBASIC13.33□□□□□ -0.28
CHKB-CPT1BH3BT56 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHKB-CPT1BH3BT56 AC068473.5-201ENST00000616428 2072 ntBASIC13.32□□□□□ -0.28
CHKB-CPT1BH3BT56 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHKB-CPT1BH3BT56 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHKB-CPT1BH3BT56 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHKB-CPT1BH3BT56 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CHKB-CPT1BH3BT56 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC13.32□□□□□ -0.28
CHKB-CPT1BH3BT56 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHKB-CPT1BH3BT56 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHKB-CPT1BH3BT56 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CHKB-CPT1BH3BT56 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHKB-CPT1BH3BT56 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CHKB-CPT1BH3BT56 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHKB-CPT1BH3BT56 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHKB-CPT1BH3BT56 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CHKB-CPT1BH3BT56 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms