Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
TBC1D3FA6NER0 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.76■■□□□ 1.39
TBC1D3FA6NER0 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TBC1D3FA6NER0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TBC1D3FA6NER0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.75■■□□□ 1.39
TBC1D3FA6NER0 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TBC1D3FA6NER0 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
TBC1D3FA6NER0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
TBC1D3FA6NER0 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TBC1D3FA6NER0 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
TBC1D3FA6NER0 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TBC1D3FA6NER0 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TBC1D3FA6NER0 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TBC1D3FA6NER0 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
TBC1D3FA6NER0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TBC1D3FA6NER0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.74■■□□□ 1.39
TBC1D3FA6NER0 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.74■■□□□ 1.39
TBC1D3FA6NER0 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TBC1D3FA6NER0 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.74■■□□□ 1.39
TBC1D3FA6NER0 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TBC1D3FA6NER0 AC137630.3-201ENST00000607245 391 ntBASIC23.74■■□□□ 1.39
TBC1D3FA6NER0 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.74■■□□□ 1.39
TBC1D3FA6NER0 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TBC1D3FA6NER0 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TBC1D3FA6NER0 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TBC1D3FA6NER0 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.73■■□□□ 1.39
TBC1D3FA6NER0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.73■■□□□ 1.39
TBC1D3FA6NER0 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
TBC1D3FA6NER0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TBC1D3FA6NER0 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
TBC1D3FA6NER0 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
TBC1D3FA6NER0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TBC1D3FA6NER0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.72■■□□□ 1.39
TBC1D3FA6NER0 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TBC1D3FA6NER0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.72■■□□□ 1.39
TBC1D3FA6NER0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TBC1D3FA6NER0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.72■■□□□ 1.39
TBC1D3FA6NER0 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.72■■□□□ 1.39
TBC1D3FA6NER0 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
TBC1D3FA6NER0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TBC1D3FA6NER0 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TBC1D3FA6NER0 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TBC1D3FA6NER0 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
TBC1D3FA6NER0 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
TBC1D3FA6NER0 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
TBC1D3FA6NER0 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.71■■□□□ 1.39
TBC1D3FA6NER0 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
TBC1D3FA6NER0 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
TBC1D3FA6NER0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TBC1D3FA6NER0 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
TBC1D3FA6NER0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
TBC1D3FA6NER0 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.7■■□□□ 1.39
TBC1D3FA6NER0 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.7■■□□□ 1.39
TBC1D3FA6NER0 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TBC1D3FA6NER0 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TBC1D3FA6NER0 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TBC1D3FA6NER0 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TBC1D3FA6NER0 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
TBC1D3FA6NER0 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TBC1D3FA6NER0 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TBC1D3FA6NER0 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TBC1D3FA6NER0 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.69■■□□□ 1.38
TBC1D3FA6NER0 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.69■■□□□ 1.38
TBC1D3FA6NER0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.69■■□□□ 1.38
TBC1D3FA6NER0 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
TBC1D3FA6NER0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
TBC1D3FA6NER0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
TBC1D3FA6NER0 MIR4281-201ENST00000580852 62 ntBASIC23.68■■□□□ 1.38
TBC1D3FA6NER0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.68■■□□□ 1.38
TBC1D3FA6NER0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.68■■□□□ 1.38
TBC1D3FA6NER0 AC021242.3-201ENST00000607598 1377 ntBASIC23.67■■□□□ 1.38
TBC1D3FA6NER0 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.67■■□□□ 1.38
TBC1D3FA6NER0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.67■■□□□ 1.38
TBC1D3FA6NER0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.67■■□□□ 1.38
TBC1D3FA6NER0 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
TBC1D3FA6NER0 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TBC1D3FA6NER0 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TBC1D3FA6NER0 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
TBC1D3FA6NER0 TSPY9P-201ENST00000440215 945 ntBASIC23.66■■□□□ 1.38
TBC1D3FA6NER0 TSPY11P-201ENST00000442607 1045 ntBASIC23.66■■□□□ 1.38
TBC1D3FA6NER0 UNC93B8-201ENST00000511903 705 ntBASIC23.66■■□□□ 1.38
TBC1D3FA6NER0 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
TBC1D3FA6NER0 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.66■■□□□ 1.38
TBC1D3FA6NER0 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.66■■□□□ 1.38
TBC1D3FA6NER0 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.66■■□□□ 1.38
TBC1D3FA6NER0 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TBC1D3FA6NER0 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TBC1D3FA6NER0 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TBC1D3FA6NER0 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.65■■□□□ 1.38
TBC1D3FA6NER0 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TBC1D3FA6NER0 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TBC1D3FA6NER0 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.64■■□□□ 1.38
TBC1D3FA6NER0 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.64■■□□□ 1.38
TBC1D3FA6NER0 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
TBC1D3FA6NER0 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
TBC1D3FA6NER0 KRT16P3-201ENST00000439127 1283 ntBASIC23.64■■□□□ 1.37
TBC1D3FA6NER0 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.64■■□□□ 1.37
TBC1D3FA6NER0 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TBC1D3FA6NER0 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TBC1D3FA6NER0 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms