Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TRAV10A0A0B4J240 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV10A0A0B4J240 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TRAV10A0A0B4J240 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV10A0A0B4J240 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV10A0A0B4J240 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAV10A0A0B4J240 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV10A0A0B4J240 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TRAV10A0A0B4J240 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC16.74■□□□□ 0.27
TRAV10A0A0B4J240 MIR4787-201ENST00000607364 84 ntBASIC16.74■□□□□ 0.27
TRAV10A0A0B4J240 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
TRAV10A0A0B4J240 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV10A0A0B4J240 AL356441.2-201ENST00000443009 864 ntBASIC16.73■□□□□ 0.27
TRAV10A0A0B4J240 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV10A0A0B4J240 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAV10A0A0B4J240 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV10A0A0B4J240 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRAV10A0A0B4J240 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV10A0A0B4J240 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
TRAV10A0A0B4J240 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC16.72■□□□□ 0.27
TRAV10A0A0B4J240 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC16.72■□□□□ 0.27
TRAV10A0A0B4J240 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC16.72■□□□□ 0.27
TRAV10A0A0B4J240 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV10A0A0B4J240 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC16.72■□□□□ 0.27
TRAV10A0A0B4J240 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC16.72■□□□□ 0.27
TRAV10A0A0B4J240 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV10A0A0B4J240 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV10A0A0B4J240 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV10A0A0B4J240 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV10A0A0B4J240 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV10A0A0B4J240 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV10A0A0B4J240 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TRAV10A0A0B4J240 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC16.71■□□□□ 0.27
TRAV10A0A0B4J240 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAV10A0A0B4J240 AC137630.3-201ENST00000607245 391 ntBASIC16.71■□□□□ 0.27
TRAV10A0A0B4J240 AC011551.1-201ENST00000614101 683 ntBASIC16.71■□□□□ 0.27
TRAV10A0A0B4J240 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAV10A0A0B4J240 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TRAV10A0A0B4J240 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV10A0A0B4J240 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV10A0A0B4J240 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV10A0A0B4J240 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV10A0A0B4J240 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV10A0A0B4J240 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV10A0A0B4J240 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAV10A0A0B4J240 CREM-229ENST00000474362 1030 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAV10A0A0B4J240 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TRAV10A0A0B4J240 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV10A0A0B4J240 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV10A0A0B4J240 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV10A0A0B4J240 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV10A0A0B4J240 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV10A0A0B4J240 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV10A0A0B4J240 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TRAV10A0A0B4J240 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC16.69■□□□□ 0.26
TRAV10A0A0B4J240 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAV10A0A0B4J240 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC16.69■□□□□ 0.26
TRAV10A0A0B4J240 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC16.69■□□□□ 0.26
TRAV10A0A0B4J240 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV10A0A0B4J240 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TRAV10A0A0B4J240 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC16.68■□□□□ 0.26
TRAV10A0A0B4J240 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV10A0A0B4J240 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV10A0A0B4J240 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV10A0A0B4J240 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV10A0A0B4J240 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV10A0A0B4J240 SSSCA1-AS1-201ENST00000567594 614 ntBASIC16.68■□□□□ 0.26
TRAV10A0A0B4J240 GRAMD4P7-201ENST00000578182 1232 ntBASIC16.68■□□□□ 0.26
TRAV10A0A0B4J240 MIR4281-201ENST00000580852 62 ntBASIC16.68■□□□□ 0.26
TRAV10A0A0B4J240 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC16.68■□□□□ 0.26
TRAV10A0A0B4J240 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV10A0A0B4J240 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV10A0A0B4J240 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV10A0A0B4J240 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV10A0A0B4J240 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV10A0A0B4J240 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV10A0A0B4J240 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV10A0A0B4J240 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV10A0A0B4J240 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV10A0A0B4J240 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAV10A0A0B4J240 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV10A0A0B4J240 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV10A0A0B4J240 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAV10A0A0B4J240 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRAV10A0A0B4J240 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC16.67■□□□□ 0.26
TRAV10A0A0B4J240 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV10A0A0B4J240 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV10A0A0B4J240 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV10A0A0B4J240 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAV10A0A0B4J240 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC16.66■□□□□ 0.26
TRAV10A0A0B4J240 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV10A0A0B4J240 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV10A0A0B4J240 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV10A0A0B4J240 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV10A0A0B4J240 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TRAV10A0A0B4J240 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAV10A0A0B4J240 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TRAV10A0A0B4J240 GAK-223ENST00000628912 497 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAV10A0A0B4J240 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV10A0A0B4J240 AC021242.3-201ENST00000607598 1377 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms